Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5917 ATGGATTCGTCAAATAACAGTGAATTTGAAATTGATGAAATGGAAGCAGAATATGGGAAGTTTCTGGATGAATATGCAAAAAATTATGACTCTTACGATGCTCAAGGATCAAATCAGACTAATCATGACATATCCCCTATTGATAACAATATAGAACCATGTCTTGAAAATTTCTACGGTCAAACATTTGGTAGATTGTCAATTAGTGGTCAACTAATACAATCATATGTTTTTGAATTGACACTTGCTCAACTAAACAAGGCAACAAAGACACAATTTACACTACCTTCTGAATTTAGCAATTATGTAAGGCAATACAATTTTCATAAGCTGGTTCTACAAGTACCAAACAAGAGCAGTTCAATTGTTCACTTAAAATATCCGGAAAATCATTCGGAGAATGTCAAAATTGCAAGAGGATGGAAAAATTTCTGTTTGGCCAACAGTATTGAATTAGGAGATAGAATAAGTTTTGAATTCAAAGATATAAACTTAAATGTTTGTCAGGTTTCCATAGTTTAG 522 0.3199 MDSSNNSEFEIDEMEAEYGKFLDEYAKNYDSYDAQGSNQTNHDISPIDNNIEPCLENFYGQTFGRLSISGQLIQSYVFELTLAQLNKATKTQFTLPSEFSNYVRQYNFHKLVLQVPNKSSSIVHLKYPENHSENVKIARGWKNFCLANSIELGDRISFEFKDINLNVCQVSIV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5917 173 Pfam B3 DNA binding domain 78 161 IPR003340 GO:0003677
Tpr2g5917 173 CDD B3_DNA 78 164 IPR003340 GO:0003677
Tpr2g5917 173 ProSiteProfiles B3 DNA-binding domain profile. 78 173 IPR003340 GO:0003677
Tpr2g5917 173 SUPERFAMILY DNA-binding pseudobarrel domain 76 168 IPR015300 -
Tpr2g5917 173 Gene3D - 74 173 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5917 Tpr-Chr2 70999465 71000434 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr2g5917 B3 4.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5917 - K17570 pvu:PHAVU_010G047200g 45.4394