Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5902 ATGACAGAGGTGGCAAGATCAGTGGTTCATGAGGTTTTAGGAGACGGAATCATCGACGTCGATGAACCAATAGTCAGTTACATAGTCAACGTCCTCGCCGACGAGGATTTCGACTTCGGACTTGACGGCGAAGGCGCTTTCGATGCTCTCGGAGATCTCCTCGTCGCCGCCGGCTGTGTCCCTGATTTCCCCGAGTGTCGCTCCGTATGCAGCAAACTTTCCGACAAGTTTGGGAAGCACGGTTTGGTGAAGGCGAAGCCAACGGTACGAAGCCTTGCGGCGCCGTTTCGTATGAATGAGGGATTAGATGATGGTGAAGCTCCGAAGAAGAAACCTGAGCCAGTAGATGGTCCTCTCTTATCGGAACGTGATAAATTGAAGATTGAAAGGAGAAAGAGGAAAGATGAACGCCAGAGAGAGGCGAAGTACCAATTGCATTTGGCGGAGATGGAAGCGGTGCGAGCAGGGATGCCTGTTGCATGTGTGAAGCATGAGGCTGGTGGTGGACACACTGTGAAGGATATTCATATGGATAATTTCACTATTTCTGTTGGTGGTCATGATCTCATTGTTGATGGTTCTGTTACGCTCTCTTTTGGAAGGCATTATGGGCTTGTTGGTAGAAATGGGACGGGTAAAACAACTTTCCTAAGGCACATGGCCATGCATGCCATAGATGGAATTCCCAGGAATTGTCAGATTTTACACGTCGAGCAAGAAGTTGTTGGTGATGATACATCCGCCTTGCAGTGTGTTCTTAATACTGATATTGAGAGAGCTCAGCTTCTGGAGGAAGAAGCTCAACTAATAGCCAAACAGAGGGAAACTGAGGACAGTACCGAAAAGGGAAGTGATGCAAATGGAGTTGTTAAAGTAGATGCTATTTCACAAAGGCTTGAGCAAATATACAAGAGGCTTGAGTTAATTGATGCTGATGCTGCTGAGTCACGAGCAGCATCCATACTTGCGGGTCTGAGTTTCTCTCCTGAGATGCAGAAGAAGGCAACAAAAACATTTTCTGGAGGGTGGAGGATGCGGATAGCTCTTGCTCGTGCACTGTTTATAGAGCCTGATATGTTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCACGCTGTCTTATGGCTTGAATCGTACTTGGTTAAATGGCCGAAAACATTTATTGTCGTTTCTCATGCTAGAGAATTTTTAAACACGGTGGTTACTGATATAATTCACTTACAAAACCAAAAGCTAACTACTTATAAAGGGAATTATGATACTTTTGAAAGGACTCGGGAAGAACAGATTAAAAACCAACAAAAAGCAGTAGAGGCACATGAGCGTTCAAGAGCTCATATGCAGACCTTCATTGACAAGTTTCGCTATAATGCCAAGAGGGCATCACTTGTTCAATCTAGAATCAAGGCTCTGGATCGATTGGGCCATGTAGATGCAATTATTAACGATCCCGACTACAAGTTTGAATTCCCCACTCCAGATGATAGACCAGGTGCACCAATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGAGGGCCCATTCTATTTAGGAATTTGAACTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCAAATGGTATCGGTAAATCTACTATACTTAAGTTAATTGCCGGTGAACTACAGCCAAGTTCTGGGACTGTCTTCCGTTCTGCCAAGGTTCGTATAGCGGTGTTCAGTCAGCACCATGTTGATGGACTTGACTTATCCTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAACTTCGAGGTCACTTAGGTTCTTTTGGTGTAACTGGAAATCTTGCACTTCAACCTATGTATACTTTGTCAGGTGGTCAGAAAAGTAGAGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAACCATCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTGATTCAAGGTCTTGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCATCTTATCTCTGGAAGCGTGGAGGAGCTATGGATTGTATCAGAGGGAAGAGTGGCACCATTCCATGGCAGCTTCGGAGAGTATAAGAAGATACTACACTCATCTTAG 2142 0.4468 MTEVARSVVHEVLGDGIIDVDEPIVSYIVNVLADEDFDFGLDGEGAFDALGDLLVAAGCVPDFPECRSVCSKLSDKFGKHGLVKAKPTVRSLAAPFRMNEGLDDGEAPKKKPEPVDGPLLSERDKLKIERRKRKDERQREAKYQLHLAEMEAVRAGMPVACVKHEAGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLLEEEAQLIAKQRETEDSTEKGSDANGVVKVDAISQRLEQIYKRLELIDADAAESRAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFERTREEQIKNQQKAVEAHERSRAHMQTFIDKFRYNAKRASLVQSRIKALDRLGHVDAIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFRNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRGHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWIVSEGRVAPFHGSFGEYKKILHSS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5902 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 121 712 - -
Tpr2g5902 713 ProSitePatterns ABC transporters family signature. 339 353 IPR017871 GO:0005524
Tpr2g5902 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 700 IPR027417 -
Tpr2g5902 713 Pfam ABC transporter 520 650 IPR003439 GO:0005524
Tpr2g5902 713 Pfam ABC transporter 194 367 IPR003439 GO:0005524
Tpr2g5902 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 439 IPR027417 -
Tpr2g5902 713 Gene3D - 132 448 IPR027417 -
Tpr2g5902 713 Gene3D - 467 712 IPR027417 -
Tpr2g5902 713 MobiDBLite consensus disorder prediction 102 140 - -
Tpr2g5902 713 CDD ABCF_EF-3 503 695 - -
Tpr2g5902 713 CDD ABCF_EF-3 175 412 - -
Tpr2g5902 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 712 IPR003439 GO:0005524
Tpr2g5902 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 435 IPR003439 GO:0005524
Tpr2g5902 713 Pfam ABC transporter 406 487 IPR032781 -
Tpr2g5902 713 ProSitePatterns ABC transporters family signature. 622 636 IPR017871 GO:0005524
Tpr2g5902 713 SMART AAA_5 528 695 IPR003593 -
Tpr2g5902 713 SMART AAA_5 199 412 IPR003593 -
Tpr2g5902 713 MobiDBLite consensus disorder prediction 100 140 - -
Tpr2g5902 713 PANTHER NON-TRANSPORTER ABC PROTEIN 121 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5902 Tpr-Chr2 70720636 70729738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5902 465 664 Calmodulin-binding Proteins AT2G36910 27.155 5.79e-11 64.3