Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5901 ATGGATTGTGATTTTGATGATGTTGGTATTGTGGAGAAAGATCCAACTTTACGTTACGCACGGTATGATGAACTGTTAGGGAAAGGAGCATTCAAGTCTGTATATAAAGCTTTTGATGAAGTAGATGGAATCGAAGTTGCTTGGAACCGAATTTGTATAGAGGATGTTATGCAATCACCCCAAAATTTGGAGAAGTTGTATTCTGAGGTTCATCTCCTCAAGTCACTGAAACACGAAAATATCATTAAGTTCTATAGCTCTTGGGTGGATGAAAAGACCAGGACTATCAATATGATAACTGAATTGTTCACGTCTGGGAGTTTGAGGCAGTATCGTAAGAAGCATAAGAATGTGGATATGAAGGCAATCAAGAACTGGGCGAGGCAGATTCTTCGTGGCTTGTGCTTTCTGCACAGTCACAATCCTCCTGTTATTCATAGGGATCTAAAATGTGATAACATTTTTGTTAATGGGAATAATGGACAAGTTAAGATTGGAGATCTCGGATTGGCAATTGTCATGCAGCAGCCTACTGCCCGGAGTGTTATTGGTACTCCGGAATTCATGGCCCCAGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGTGAGTACCCGTATAGTGAATGCAAAAATCCGGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTTCTCTTGCTAAAGTGAATGATCCTGAAGTGAAGCAATTTATAGAGAAGTGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAACTGCTGAAAGACCCATTCCTCGCAACTGGAAATGCGAAGGAGATCTATCATGATCCCCTGCTGCTGCCTAATTCCCCGACTAAATCAATGAATTCACCAACTTGTGAGCCCCATCCCATGGAGATAGATTCAAACCTCAGGCATACATCACATGGCTCCTCTGTGGAAAGAATTAAAGAAACTTCTCAAGTTTCAATTCTTGATCTCATGAGGAAGACAGAGAACAATGAATTTAGGTTAAGAGGGGAGAAGAATGCTGAACGTACAATTTCACTTACACTGCGAATTGCTGATGCTAATGGTGGAGCTAGGAATATCCATTTTCCATTCTATATTGATTCCGACACAACAATTTCAATTGCTGAGGAGATGGTGGAACATCTTGAGCTCAAGGATGAGGATGTAGCTGTCATTGCTGAGCTAATACACAACATGATTTTTGAGCTTGTGCCTAACTGGAAACCCTTGTGCGAGAACTTCTCATCTGGAGCAGATAATTTGTACAGTCCTTCAGAAGCTCAGAATGGTGAACAGTTAAACTGCCATTGGTCATTGGGATCAAATAACTTTGATATGAAGGCAATGTATGAGGATTTAGGTCAGTCACAGCTTGACGGGGAAGAGCAGGACAAACAAGAATCTGTTTCATCAGATATTTCAGCTGAGTATGGGATTGCAGTTGCCACTGATTCTAAAGGTGTAGAGCCTGATTGTTTTATTCTTCATGAATGTTGCAAGGGATCCCATGGCTTAAATTCCAATGTAAACAATAATCAATCAGAGAACTCAGCAGTCTCATGGTCCAGTCCATCCATAAACTTTGACATGTCAAGCAAATGCTTTCTTACTCAACAGGAAAAAGATCATTTAAACGAGCTACAGTTGGAGCTTGAAGCAATTGATATCCAGTATCAGCAAAGTTTTCGCGAGCTTGTGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAAGAGATGGACTTCAAAGAAGTTATCAGTTATAGGATGA 1818 0.4032 MDCDFDDVGIVEKDPTLRYARYDELLGKGAFKSVYKAFDEVDGIEVAWNRICIEDVMQSPQNLEKLYSEVHLLKSLKHENIIKFYSSWVDEKTRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSHNPPVIHRDLKCDNIFVNGNNGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPASLAKVNDPEVKQFIEKCLVPASMRLPASELLKDPFLATGNAKEIYHDPLLLPNSPTKSMNSPTCEPHPMEIDSNLRHTSHGSSVERIKETSQVSILDLMRKTENNEFRLRGEKNAERTISLTLRIADANGGARNIHFPFYIDSDTTISIAEEMVEHLELKDEDVAVIAELIHNMIFELVPNWKPLCENFSSGADNLYSPSEAQNGEQLNCHWSLGSNNFDMKAMYEDLGQSQLDGEEQDKQESVSSDISAEYGIAVATDSKGVEPDCFILHECCKGSHGLNSNVNNNQSENSAVSWSSPSINFDMSSKCFLTQQEKDHLNELQLELEAIDIQYQQSFRELVKMREEAIENVKKRWTSKKLSVIG* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5901 605 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 600 - -
Tpr2g5901 605 Gene3D Transferase(Phosphotransferase) domain 1 103 284 - -
Tpr2g5901 605 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5901 605 Coils Coil 560 580 - -
Tpr2g5901 605 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5901 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Tpr2g5901 605 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5901 605 PANTHER WNK KINASE 2 600 - -
Tpr2g5901 605 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 360 416 IPR024678 GO:0004674|GO:0005524
Tpr2g5901 605 Gene3D - 358 444 - -
Tpr2g5901 605 SUPERFAMILY Protein kinase-like (PK-like) 23 324 IPR011009 -
Tpr2g5901 605 CDD STKc_WNK 18 277 - -
Tpr2g5901 605 Gene3D Phosphorylase Kinase; domain 1 5 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5901 Tpr-Chr2 70714450 70717692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5901 5 604 MAP Kinase Kinase Kinase AT5G41990 51.980 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr2g5901 Pkinase 2.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5901 K08867 - gmx:100272202 857.825