Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5888 ATGCAAATGGCGGATACAGTGGTTATTAATGTTTCCAACAACATAAGTAGCAACGGAGACGTGGTTGTCAATGGCAACGACGAGAAAATACTGATGAAATTAAGTGGCGGGCACCATGGCGTGGATCCAGCCAACGCACTGGACAATGCCCGCCACGAATTCGGTGAACATGGCGGTGTCAACATGTCGATTGAGGCTTCCGTCATGTTCACCGTCATGGAACCAGAGACTCTCAGCCGAATTATCGCCAAAGAGCTTGGTCCAGAAAATGGTTATTTTAGTTACAGCCGCAATTTTAACCCAACTGTCCTCAGTCTCGGCCGTCAGATGGCGGCACTCGAAGGCACTGAGGCCGCCTACTGTACGGCCAGCGGCATGTCTGCCATTGCGTCTTCTCTGCTGCAACTCTTAAGTAGCGGCGGACACGTGGTGGCTTCTAGTAGCTTGTACGGTGGGACCCACTCACTCCTCACACATTTGTTACCAAGGATATGCAACATAACCACAACATTTGTTGATATTGCGGATTTAGAAGCGGTGGGGAATGTGATTGTGGAAGGGAAGACAAAAGTGCTTTATTTTGAGTCTATTGCGAATCCAAGCTTGAAGGTGGCGAATACTCCGGAGCTGGCTAGAATTGCACACAAAAAGGGAGTGACAGTGGTTGTTGACAACACATTTGCTCCCATGGTGCTTTCTCCTGCTCGTCTTGGTGCAGATGTTGTTGTTCATAGTGTCTCCAAGTTTATCAGTGGTGGTGGTGACGTTATTGCAGGAGCAGTGTGTGGGTCTGCAAGCTTTGTAAATTCCTTGATGGACTCTCAACAAGGGACCATAATGCTTTTGGGTCCAACAATGAATGCAAATGTGGCCTTTGATCTAGCACAAAGAATCCCACACTTAGGTCTTCGGATGAAAGAACATAGCAACCGTGCATTGGAGTTTGCAACCAGACTTAAGAATTTAGGATTGAATGTGATCTACCCTGGCCTTGAAGACCACCCACAACATGAACTATTGAAATCAATTGGCAACAAAGATTATGGATATGGTGGAATTCTATCCATTGACATGGGGACAGTGAAGAAGGCTAACAAATTCATGAGCTATTTGCAAAACTATAGTCAATTTGGTTTCATGGCTGTTAGTTTAGGGTACTATGAGACCCTAATGTCTTGCACTGGTAGTAGCACAAGTAGTGAGATGAATGAGGAGGAACAAAAACTTGCTGGAATCACACCTGGACTAATAAGGATGTCTGTTGGATATATTGGAACATTGGAGCAAAAGTGGAGTAAGTTGGAAAAAGCAGTTCTTAAATTCAATGAAAATTATTAG 1338 0.4507 MQMADTVVINVSNNISSNGDVVVNGNDEKILMKLSGGHHGVDPANALDNARHEFGEHGGVNMSIEASVMFTVMEPETLSRIIAKELGPENGYFSYSRNFNPTVLSLGRQMAALEGTEAAYCTASGMSAIASSLLQLLSSGGHVVASSSLYGGTHSLLTHLLPRICNITTTFVDIADLEAVGNVIVEGKTKVLYFESIANPSLKVANTPELARIAHKKGVTVVVDNTFAPMVLSPARLGADVVVHSVSKFISGGGDVIAGAVCGSASFVNSLMDSQQGTIMLLGPTMNANVAFDLAQRIPHLGLRMKEHSNRALEFATRLKNLGLNVIYPGLEDHPQHELLKSIGNKDYGYGGILSIDMGTVKKANKFMSYLQNYSQFGFMAVSLGYYETLMSCTGSSTSSEMNEEEQKLAGITPGLIRMSVGYIGTLEQKWSKLEKAVLKFNENY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5888 445 Pfam Cys/Met metabolism PLP-dependent enzyme 57 422 IPR000277 GO:0019346|GO:0030170
Tpr2g5888 445 PIRSF CGS 35 442 IPR000277 GO:0019346|GO:0030170
Tpr2g5888 445 SUPERFAMILY PLP-dependent transferases 70 426 IPR015424 -
Tpr2g5888 445 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 32 439 IPR000277 GO:0019346|GO:0030170
Tpr2g5888 445 Gene3D Aspartate Aminotransferase, domain 1 302 444 IPR015422 GO:0003824
Tpr2g5888 445 PANTHER METHIONINE GAMMA-LYASE-LIKE 32 439 - -
Tpr2g5888 445 Gene3D - 44 298 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5888 Tpr-Chr2 70602178 70604046 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5888 K01761 - gmx:100777207 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5888 2 70602178 70604046 Tpr1g0934 1 8021438 8025156 PCT