Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5876 ATGTTGTGCTACTACTACATTTTGTTTGCTATTTTCTTTCTATCATCTTTTTTCTTCAATAGAATAAGACTATCTTATAAATATTCAAAAAATCATACTTCACACTTCTCCACTACTACTTACACCCCTCCTTCATACCCTATCATAGGTTGCCTTATATCTTTCTACCAAAATCGCCGCCGTCTTCTAGATTTTTACACTCATTATCTCTCTCAATCTCCGACTCAAACCATCCTCCTTAACCGCCTTGGTGCCCGGCGAACGGTTATAACTGCTAACCCTGTCAACGTCGAATACATCCTGAAAACGAATTTCACCAACTTCCCTAAAGGAAAACCCTTCACTGAAATCCTCGGAGATCTTCTTGGTTGTGGTATATTCAATGTAGACGGTAATTTATGGTCAAAACAACGTAAATTAGCTAGTCATGAATTCACAACGAGGTCTCTGAAAGACTTCGTTGCGAAAACACTTGAAGATGAAGTTCAACATAGACTTATTCCATTGCTTGAATTGGCTTGTAATGGTAATCATGTTATTGATATGCAAGATGTTTTGAGGAGACTCGCGTTTGAAATTGTGTGTAAAGTTTCACTTGGTTATGATCCTTGTTGTTTAGATTTATCTAAACCTTTGCCACCTCTTTTGTCGGCGTTCGACAAAGCTTCTGAGATAAGCGCAATGCGCGCGGCTTCACCGATTCATTTGATTTGGAAGATCAAGAGGATGCTTAATGTAGGGTCTGAGAAATCACTTAAAGAAGCTGTTGATCTCGTTCACGAATCAGTGAATGAGATAATAAGGAAGAAGAAAAAAGAAATTAGTGAAAAAATTGTTAGTGGGAGTGATTTGTTGACAAAGTTGTTGGAGGCCGGGAATGATGAAATCATGGTCCGAGATATGGTTATTAGTATGATCATGGCGGGGAGAGACACGACATCGGCGGCTATGACATGGCTTCTTTGGTTGTTGTCAAAGAATCCAAGCAAAGAGGAATTGATAGTGAAAGGAGTGAGGGAAGTTTTTGGTGGAAAAAATAATGATGATGAGTTTGAGTTAATGAGGTCTTTTGATTATGAAGGTTTGAAAGAGATGAAGTATTTGAAAGCATCTTTGTGTGAGTCAATGAGGTTGTATCCTCCGGTGGCATGGGATTCGAAGCATGCCATCGGCGATGACATGTTGCCGGACGGAACTAGGGTTGGAAAAGGTGATAGGGTGACTTATTTTCCATATGGAATGGGGAGGATGGAGGCTTTATGGGGAAAAGATTGGGAAGAGTTTAAACCAGACCGGTGGTTCGATAAACCGGTGGGAGAAGAGGATAATAATGGAGTTTTGAAAGTTGTGAGTCCTTACAAGTTTTCGGTTTTTCAGGCTGGTCCAAGAGTTTGCCTTGGAAAAGATATGGCTTTTATTCAAATGCAATATGTTGTGGCTTCAATTCTAAATCGGTTTGAATTTAAGCCGGTGTCTAATGATCAACCAATTTTTGTTCCTTTTCTTACTGCTTATATGGCTGGTGGGTTCAAAGTGAGAGTTCACAAAAGAGTTCAATATGAAAAGTATGGATGCAAAATGGGAGCTTTGAAATGGTGCTATACATGCTCTCTACCGGCTTCTGCTTATTTCATAACTTTATATTTTTTAAATCAATGA 1659 0.3912 MLCYYYILFAIFFLSSFFFNRIRLSYKYSKNHTSHFSTTTYTPPSYPIIGCLISFYQNRRRLLDFYTHYLSQSPTQTILLNRLGARRTVITANPVNVEYILKTNFTNFPKGKPFTEILGDLLGCGIFNVDGNLWSKQRKLASHEFTTRSLKDFVAKTLEDEVQHRLIPLLELACNGNHVIDMQDVLRRLAFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAMRAASPIHLIWKIKRMLNVGSEKSLKEAVDLVHESVNEIIRKKKKEISEKIVSGSDLLTKLLEAGNDEIMVRDMVISMIMAGRDTTSAAMTWLLWLLSKNPSKEELIVKGVREVFGGKNNDDEFELMRSFDYEGLKEMKYLKASLCESMRLYPPVAWDSKHAIGDDMLPDGTRVGKGDRVTYFPYGMGRMEALWGKDWEEFKPDRWFDKPVGEEDNNGVLKVVSPYKFSVFQAGPRVCLGKDMAFIQMQYVVASILNRFEFKPVSNDQPIFVPFLTAYMAGGFKVRVHKRVQYEKYGCKMGALKWCYTCSLPASAYFITLYFLNQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5876 552 PANTHER CYTOCHROME P450 94B3 27 516 - -
Tpr2g5876 552 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 SUPERFAMILY Cytochrome P450 43 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 Pfam Cytochrome P450 43 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 Gene3D Cytochrome P450 35 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PANTHER CYTOCHROME P450 27 516 - -
Tpr2g5876 552 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5876 552 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5876 Tpr-Chr2 70350735 70352601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5876 2 517 Cytochrome P450 AT3G48520 58.494 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5876 K20665 - gmx:100800427 665.996