Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5871 ATGTTTTCTCCTAAAAAATATGATGTTTTTCTTAGCTTTCGAGGTGAAGATACACGCGACAACATCGCAAGCCATCTTCATGAAGCATTAATCCAAAAGAAAGTTGAAACATTTACGGACGACAAACTGAAGCTTAAAAAAGGAGAAAGAATTGGGCCATCACTCATCAAAGCCATTGAAGAATCACATGTTTCTATTGTCATTTTCTCAGAAAACTATGCTTCCTCGGGGTGGTGTTTGGATGAAATCGTCAAGATTATGGAATGCCAGAAAGAAAGAGGACAAATTGTGATACCTGTGTTCTACAAAATAGATCCATCAAATGTGAGACATCAAAGTGGGACATATGAAGAATGGTTTGTGAAACATCTCAATAGCAACAATAGTCACAAAGTGCTCAATTGGAGAAGTGCTCTCACAGAAGCAGCTAATTTGGCTGGTTGGGATTTTCAAACTTATGGGTGTGAATCTCAATTCATTAAAGACATTGTTAAAGATATTTTGCAACAACTGAATCTCATACACCCAATTGAATTGAAGGGAGTGGTTGGAGTTGAGGAAAATTATAAAAGAGTTAAATCATTATTGAAAATGGGCTCAAGAGAAGTTCGAGTGATTGGCATATGGGGCATGGGTGGCATAGGTAAGACAACCCTAGCACTTGTTTTACATGCCAAATTGTCTTCTCAATTTGAAGGTCATTGCTTTTTGGCAAATGTAAGGGAACAAATAGAGAAGAATAATATAGATTTCTTGCGCAACAAGCTTTTTTCAGAGTTGTTAGAGGACAAAAATCTCCATGTTAATATACCCAAAGTTGAATATCATTTTGTGATGAATAGACTTAGACGTAAAAAAGTTCTTATTGTTTTGGATGACGTGGCTACCTCAGAACAATTAGATGACCTAATCAGTGATTATGAATGTTTGGGACTTGGAAGTAGAGTGATTGTAACCACTAGAGATAAGCATGTAATTAAAGATGTTGATGAAATATTTGAGGTCAAGGAATTGAACGAACATGATTCTCTTCAGCTTTTCTGTTTGAATGCATTCAAAGAAAAACATCCTAAAAGTGCATATGAAGAGCTCTCGAAAAATGTAATTGCCTATTGCAAAGGAAACCCTTTGGCTTTAAGAGTTTTGGGTGTGCGTCTTCGTTCAAGAAGTAAAGAGGAGTGGAAAGCTGAATTGGAAAAAATCAAGAAGATTCCGGACATAAAAATTCATAATGTGTTGAAATTGAGTTATGATGACTTAGATAGTGATCAACAAAATATTTTGTTAGACATAGCATGCTTTTTCAAAGAAGAATCTAGAGACCGCGTGACAAATCTATCGAAAGCTTTCCACCCATTTATTGGGATTCAAAACCTAGTAGAAAAGTCTCTTATAACCATTTCAAATAAGAGTACAATACAAATGCATGACTTAATACAAGAAATGTGCTGGAATGTTGTTCATCAAGAATCCCCTAAAGACCCTGGAAGCAGAACTCGATTGTGGGATCCCAATGAAGTGTATGATGTACTAAAATATAATAAGGGAACTAAAGCTGTAGAAGGAATAACTTTAGATGTGTCTAAAATTGAGGATCTACATTTGAAGTTTGATTCTTTTACAAAAATGTATGAGATGAGATTTCTTAAATTCTATTATGGAAATTGCAATGTGGCAAGTAATATATATCTTCCGGACGGTCTGGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATATTGTCTAAAGTCTTTGCCATCAAACTTTTGTGCTAAATATCTTGTTGAGCTTTCCATGCCTTACAGCAACCTTCAAAAGCTTTGGGACGGAGTTCAGAATCTTGCAAATTTAAAGGAAATTGACCTTAGATTCAGCAATGAGTTGGTTGATGTCCCAGACTTGTCTAAGGCTACTAATTTGGAATGGTTGGCACTTACTGGGTGTAGAAATTTGCGCGAAATCCATCCTTCCATTTTGTCTCTCGACAAGCTTAAAGATCTCGAATTAGAAGGTTGTACGAAGATTGAAAGTTTTCAAACTGACAATCATTTAGATTCTCTTCAAACCATCCAACTCAGCAACTGCTCATCTCTGAAAGAATTCTCGGTCACTTCAAATAAACTCGAGAAACTGTGGTTAGACGGTACATCTATCCAAGAATTGCCATCATCAATTTGGTGTTGCAAGAAACTGAAGATGATTGATCTACACAATTGTGAGAATCTTATTGGTTTTGGAGAAAATGAAAACTATATAGAAATTGGATCTCTTAGCACTCTGATTCTTTCTGGCTGCAAAAAATTCAATACATCAAATTTGTGTTTCAACTTCAAAGCATGGCAATCAACTTTAACCTCATTGAGTTTAGAAAATTGTTGCAACTTAGAGCCACTTCCTGATAGCATTGGTTTATTGTCATCATTGCAATGCTTAAGACTAAGTGGAAGCAATATTGAGAGATTGTCACCACACATCAAAAACCTTAACAACCTTAAAGAGCTAAGGTTAGACAATTGCAAGAAACTCGTGTCCATGTCTGTGTCTGAGCTTCCACCATCATTAAGATTGTTTAGTGCTATCAACTGCATTTCTTTAGACACGGTCACGGACCTTACTACATTGGACATACCTTTTGAACATAGAACTAAACCTCAACAATATTATCAATCTGTGATCTTCCCAGGAGGTCATGTTCCTAAGAGATTTAGTTTTCATTCAGAAGAAAATCATCATCACGGTTCAACTTCTTCAGTAACTATTAGCCATCTTCCAGAATCTGGTTTATATGGTTTAGTGTTTTGTATCATTCTTTCTGAGTCAATTGATCAGTATCGATACGTTCAATGTTCTGTTAACCAAAATTCCAAAAGAATAGGTGTAAAATCCGCCTCTTTGCGTAATCTTGTTATGCATTTGGTTACGGATCATGTGTTTCTTTGGTATCTTGACATCAAAAGTGGCGCTCAAAACATTTCTTTGAATAGTCAAATACAGGAAAGTGGAGCATGGGATAATCCTTGCAACATATCCTTTGAATTTTCACTTGAAAATGAGGAGGGAGAATGGTCAACTGAGAGGATAAAGGGCTGTGGGGTGTTCCCACTTTATCACTTACAAGAAGCTAACAATTTTAAAGAGGACTGA 3153 0.36 MFSPKKYDVFLSFRGEDTRDNIASHLHEALIQKKVETFTDDKLKLKKGERIGPSLIKAIEESHVSIVIFSENYASSGWCLDEIVKIMECQKERGQIVIPVFYKIDPSNVRHQSGTYEEWFVKHLNSNNSHKVLNWRSALTEAANLAGWDFQTYGCESQFIKDIVKDILQQLNLIHPIELKGVVGVEENYKRVKSLLKMGSREVRVIGIWGMGGIGKTTLALVLHAKLSSQFEGHCFLANVREQIEKNNIDFLRNKLFSELLEDKNLHVNIPKVEYHFVMNRLRRKKVLIVLDDVATSEQLDDLISDYECLGLGSRVIVTTRDKHVIKDVDEIFEVKELNEHDSLQLFCLNAFKEKHPKSAYEELSKNVIAYCKGNPLALRVLGVRLRSRSKEEWKAELEKIKKIPDIKIHNVLKLSYDDLDSDQQNILLDIACFFKEESRDRVTNLSKAFHPFIGIQNLVEKSLITISNKSTIQMHDLIQEMCWNVVHQESPKDPGSRTRLWDPNEVYDVLKYNKGTKAVEGITLDVSKIEDLHLKFDSFTKMYEMRFLKFYYGNCNVASNIYLPDGLDSLSDKLRYLEWHRYCLKSLPSNFCAKYLVELSMPYSNLQKLWDGVQNLANLKEIDLRFSNELVDVPDLSKATNLEWLALTGCRNLREIHPSILSLDKLKDLELEGCTKIESFQTDNHLDSLQTIQLSNCSSLKEFSVTSNKLEKLWLDGTSIQELPSSIWCCKKLKMIDLHNCENLIGFGENENYIEIGSLSTLILSGCKKFNTSNLCFNFKAWQSTLTSLSLENCCNLEPLPDSIGLLSSLQCLRLSGSNIERLSPHIKNLNNLKELRLDNCKKLVSMSVSELPPSLRLFSAINCISLDTVTDLTTLDIPFEHRTKPQQYYQSVIFPGGHVPKRFSFHSEENHHHGSTSSVTISHLPESGLYGLVFCIILSESIDQYRYVQCSVNQNSKRIGVKSASLRNLVMHLVTDHVFLWYLDIKSGAQNISLNSQIQESGAWDNPCNISFEFSLENEEGEWSTERIKGCGVFPLYHLQEANNFKED* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5871 1050 Pfam NB-ARC domain 190 403 IPR002182 GO:0043531
Tpr2g5871 1050 Pfam TIR domain 6 176 IPR000157 GO:0007165
Tpr2g5871 1050 SMART till_3 6 145 IPR000157 GO:0007165
Tpr2g5871 1050 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 1036 - -
Tpr2g5871 1050 Pfam Leucine Rich Repeat 596 615 IPR011713 -
Tpr2g5871 1050 Gene3D Ribonuclease Inhibitor 709 886 IPR032675 -
Tpr2g5871 1050 Gene3D Ribonuclease Inhibitor 517 708 IPR032675 -
Tpr2g5871 1050 Gene3D - 337 421 IPR042197 -
Tpr2g5871 1050 Gene3D - 169 335 IPR027417 -
Tpr2g5871 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 148 IPR035897 -
Tpr2g5871 1050 SUPERFAMILY L domain-like 474 871 - -
Tpr2g5871 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 431 IPR027417 -
Tpr2g5871 1050 Gene3D - 4 168 IPR035897 -
Tpr2g5871 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 1036 IPR044974 GO:0006952
Tpr2g5871 1050 PRINTS Disease resistance protein signature 205 220 - -
Tpr2g5871 1050 PRINTS Disease resistance protein signature 281 295 - -
Tpr2g5871 1050 PRINTS Disease resistance protein signature 372 386 - -
Tpr2g5871 1050 PRINTS Disease resistance protein signature 685 701 - -
Tpr2g5871 1050 ProSiteProfiles TIR domain profile. 5 171 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5871 Tpr-Chr2 70278318 70283468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5871 3 837 WRKY Transcription Factor Family AT4G12020 32.277 1.24e-113 385