Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5867 ATGGAAGATTCTTCACAAAACTTAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACACGCTTAGGCTTTACTGATCACCTATATGCAGCGTTGGTGCGTAAAAGTATAATAACTTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTAATCTCACAAAAACTCCTCCATGCAATTGAGGAATCTCTCTCAGCAGTTGTAATAATCTCCAAAAACTATGCTACCTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGTTTGTCAGGACAACAAGTGTTCCCAATCTTCTATGGCGTAGATCCCTCCGATGTAAGAAATCAAAGGGGAAGTTTTGCTGAAGCTTTTAGGAAACATGAGGAAAAATTTACTGAAAGCAAAGAGAAGGTACAAAGGTGGAGAGATGCATTGAGAGAGGTTGCCAACTTGTCAGGGTGGGATTCTAAGGATCAACATGAAACAAAACTCATTGAAGAAGTTGTTGTACAAGTATGGAAAAAACTGGAACTCAAACTCCCATCTTATTACGATGGACTGATTGCAATTGATGCAAGATTGGAAGAATTATATTCAACTCTGAAGCTAGGATCGGAGGATGTTTGTTTCGTAGGCATATGGGGTATGGGTGGGATAGGCAAAACAACTCTAGCTACTGTTCTCTTCAAGAAAATCAGAAGCCAATTTGATGTAGGTTGTTTCATTGCCAATGTTAGAGAGGTCTCTGGGGAAAGAAACCAAGGTCTATTGCAGTTGCAAAATAAAATTCTTTCACATCTGAACATTAAAGGAATGGTAATTGAAACATTAAGCCAAGGAAAGGACAGCTTAAGAAACCTTTTATCCAACAAAAAGGTTCTTCTTGTCCTTGATGATGTAAGTTCTAAAAGCGAACTTGAAAATTTGGCTGGAAGCGAAGCATGGTTTGGTCAAGGGAGTATAATAATAGTTACAACTAGGGATAAGCACCTCTTGATATCGCACACGGTATTGTTTGAAATGTATGAGAGTAAAATCTTAAATAAAAGTGAATCCCTTCAACTTTTTTGTGAAAAAGCATTTAAAGAAGATGCACCAAAAGAGGGTTATATGGAGTTGTCTAAAAGTGTGGTCGAATATGCTCAAGGCCTCCCTTTGACTCTCGAAGTGTTGGGTTCTTTTCTTTGTGAAAGAAGTATATCTGATTGGGAAGATGCTTTATCCAAGATGAAACAAGTTCCACACGATGATATCTTAAACAAACTTAGAATAAGCTATGACATGTTAGAAGATGAACACAAGACCATATTTCTAGATATTGCCTGCTTTTTTAAGGGATGGTACAGACATAAAGTGGTACAAATATTGGAAAATTGTGGCCTTCATCCAACCGTTGGAATAAATGTTCTCATAGAAAAATCGTTAGTAACTTTTGATGGAAGAGTTATCTGGATGCATGATATGCTTGAAGAAATGGGTAAAACTATAGTTTTTCAAGAGTCCCCTAATGATCCTGGTAGACGAAGCAGATTGTGGTCTCTTGAGGATATTGATAAAGTGATGAGAAAAAATAAGGGAACTGAAATTGTGCAAGGTATAGTTTTGAAATCATCACCATATACGCTGTATGAAGCACATTGGGACCCTGAGGCGTTCTCAAAGATGGGTAATCTTAGGTTACTCATTATATTATGTGATATGCATCTTTCCCTTGGTCTGAAATGTCTTTCCAGCTCACTAAAAGTGCTTGTATGGTGGGGGTATCCACTGAATGCTCTACCACTTGGACTTCAACTAGATGAGCTTGTGCATTTACAAATGATCAATAGTAAAGTTAAACGGTTGTGGAATGGAAATGAGTATTTTGGAAAGCTGAAAGTAATAGATTTGAGTAACTCCAAAGATTTACATCAAACTCCAAACATCTCTGGAATTCCAAATCTTGAAGAGCTGTATCTTAATGATTGTACGAAACTTGTCGAAGTTCACCAATCTATCAGACAACACAAAAAACTCATGATAGTTAGCTTGATGGGATGTGTAGATCTGAAAACTTTTCCAAGTAAATTGGAAATGTGTTCCTTGAAAATGCTATTTCTTTCTGATTGCTCAAATGTTAAAAGACTTCCTGATTTTGGTGAAAATATGACAGCCGTCACGGCGCTCAACTTGATGAATTGCAAAAGTCTTCTATACCTTCCAAACAGCATTAGTAACCTGAAGTCTCTCGGAATTCTCAACATATCAGGATGTTCAAAAATTTGTACCTTGCCAAATGGTATAAATCAAAACAAGGCTTTGAAGGACATTGACTTGAGCAGAACTGCTATTAGAGAATTGCATCCATCCCTATTTCAGTTAGAAAGTATCAAAAGATTATCTTTCAGTGGATGTAGCGGGCCAACATCCAATTTCAGCTGGGAGTTTCGGCTTCCTTTTGGCAAGAATTTCAGGTTTTTCCCATCTCAAACAAGCTTAACATTGCCCCCTTTTGTATCAGCCCTTTCCTCATTAACTGAATTGGATTTAAGCTATTGCAATCTCACTGATAATTCAATTCCCCGTGATATCGATTGCTTATCATCGTTAGAGAGACTAAATCTAAGTGGGAACAATTTTGTAAGCCTTCCGGCTCATTACATTGCTAATCTTACAAAGCTTCGTTATCTTGAATTGGAAGATTGCCCACAGCTTCAATCTTTACCTATTGTTCCACCACATGTACGCTTGTACGTTACAGATTCAGATGCAAGGGAAGCTAATGCATTAGATCCACAAAAGATATGGAAGGTGTTTGAATCAAGTGAAAAGGAATTCTTACAGTCATCTGTATATCGAATGTTTGATTTCTTTGATCCTATGTACTTTGAAATCCCTTCGAGATTTGATAATCAGAAATTTTTTCCCTTGAGCTCGTCGTATGTGTCAAAACTTGATTCAATTGCATCAGTAACAGTGTACATCCCTGATGATTGTCTTTCAAGTGACTGGTGGGGTGTGGCTGTATTTGTGGCCTTAGAAGCTGAAGTTCCACAGGATTCAGAGGAAGCTTCTAAAGGTTTTGAGTTCAGCAGATCCATGCGCTTGTATTGGAACTTCGATACTCTTGGACCTGAAGATGGCCCCTCCTTATCACTATCTGCAGGATCAACAGCATATAATGATCTGTACCTTATCACAATGATAGTGAGTGGTGATTTTATATACTTGCGGAGACACCGAAGAGGGCACCGGAATTCCATGCAGGAACCCTTCAGCAAGCACAGAAGGCCAGAGTTCAGGGAAAACAGTTCGTTGCGTTTCGAAATGCGAGTGGCAGGGTGCAAGATAAGGAAGTGTGGGTGGCGTCTGTTGCGAAAGGAAGATTATCTTGAAGACTTGCAAATGCTGAACAATGGTGGACTTTTTGTAGCACCTTCCGATTCCGGGCATTCAGATGGCATGAACAAATCATCTGTGGATGAATCCAAAGGGGAGGATGCTACTGCTTTGGATGTGCAGACCATAGAAAGGTCAAATGAGAACTTCTCTTTGGGCAAAATATTTCACAACTTTAGACAAGGACTTGGTTTAAGTGTGCTAGCATTGATATCAATGATGATTGGGGCTACACTAATCCATTCACCTGTGAATGATTTGCGCTTCAAAAAGTCCACGGCAACAAATGAGATCATGACTAATAAGCTATTAAAATCAGATTCGATATCCTCCAACAATATTGTACTTATGGTCAATACACCGCAATTGCAAAGCAGTCCTCGTAACAGAAATGTGAGCCAGCGGTTGTCATTTCCAGTATACCAGCCACCAAGGAGGCTGAGTTTCTGTCAGACCCACTGTTGGTTAACTTAG 3852 0.3889 MEDSSQNLKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLHAIEESLSAVVIISKNYATSAWCLDELVKILESKRLSGQQVFPIFYGVDPSDVRNQRGSFAEAFRKHEEKFTESKEKVQRWRDALREVANLSGWDSKDQHETKLIEEVVVQVWKKLELKLPSYYDGLIAIDARLEELYSTLKLGSEDVCFVGIWGMGGIGKTTLATVLFKKIRSQFDVGCFIANVREVSGERNQGLLQLQNKILSHLNIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSELENLAGSEAWFGQGSIIIVTTRDKHLLISHTVLFEMYESKILNKSESLQLFCEKAFKEDAPKEGYMELSKSVVEYAQGLPLTLEVLGSFLCERSISDWEDALSKMKQVPHDDILNKLRISYDMLEDEHKTIFLDIACFFKGWYRHKVVQILENCGLHPTVGINVLIEKSLVTFDGRVIWMHDMLEEMGKTIVFQESPNDPGRRSRLWSLEDIDKVMRKNKGTEIVQGIVLKSSPYTLYEAHWDPEAFSKMGNLRLLIILCDMHLSLGLKCLSSSLKVLVWWGYPLNALPLGLQLDELVHLQMINSKVKRLWNGNEYFGKLKVIDLSNSKDLHQTPNISGIPNLEELYLNDCTKLVEVHQSIRQHKKLMIVSLMGCVDLKTFPSKLEMCSLKMLFLSDCSNVKRLPDFGENMTAVTALNLMNCKSLLYLPNSISNLKSLGILNISGCSKICTLPNGINQNKALKDIDLSRTAIRELHPSLFQLESIKRLSFSGCSGPTSNFSWEFRLPFGKNFRFFPSQTSLTLPPFVSALSSLTELDLSYCNLTDNSIPRDIDCLSSLERLNLSGNNFVSLPAHYIANLTKLRYLELEDCPQLQSLPIVPPHVRLYVTDSDAREANALDPQKIWKVFESSEKEFLQSSVYRMFDFFDPMYFEIPSRFDNQKFFPLSSSYVSKLDSIASVTVYIPDDCLSSDWWGVAVFVALEAEVPQDSEEASKGFEFSRSMRLYWNFDTLGPEDGPSLSLSAGSTAYNDLYLITMIVSGDFIYLRRHRRGHRNSMQEPFSKHRRPEFRENSSLRFEMRVAGCKIRKCGWRLLRKEDYLEDLQMLNNGGLFVAPSDSGHSDGMNKSSVDESKGEDATALDVQTIERSNENFSLGKIFHNFRQGLGLSVLALISMMIGATLIHSPVNDLRFKKSTATNEIMTNKLLKSDSISSNNIVLMVNTPQLQSSPRNRNVSQRLSFPVYQPPRRLSFCQTHCWLT* 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5867 1283 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Tpr2g5867 1283 SMART till_3 11 151 IPR000157 GO:0007165
Tpr2g5867 1283 MobiDBLite consensus disorder prediction 1141 1161 - -
Tpr2g5867 1283 Gene3D - 8 177 IPR035897 -
Tpr2g5867 1283 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Tpr2g5867 1283 Gene3D Ribonuclease Inhibitor 546 692 IPR032675 -
Tpr2g5867 1283 Gene3D Ribonuclease Inhibitor 693 764 IPR032675 -
Tpr2g5867 1283 PRINTS Disease resistance protein signature 210 225 - -
Tpr2g5867 1283 PRINTS Disease resistance protein signature 287 301 - -
Tpr2g5867 1283 PRINTS Disease resistance protein signature 381 395 - -
Tpr2g5867 1283 PRINTS Disease resistance protein signature 620 636 - -
Tpr2g5867 1283 SUPERFAMILY L domain-like 485 899 - -
Tpr2g5867 1283 SMART LRR_typ_2 860 883 IPR003591 -
Tpr2g5867 1283 SMART LRR_typ_2 765 787 IPR003591 -
Tpr2g5867 1283 SMART LRR_typ_2 835 859 IPR003591 -
Tpr2g5867 1283 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
Tpr2g5867 1283 Gene3D - 178 337 IPR027417 -
Tpr2g5867 1283 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 707 IPR044974 GO:0006952
Tpr2g5867 1283 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 721 919 IPR044974 GO:0006952
Tpr2g5867 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 440 IPR027417 -
Tpr2g5867 1283 Gene3D Ribonuclease Inhibitor 765 904 IPR032675 -
Tpr2g5867 1283 PANTHER TMV RESISTANCE PROTEIN N-LIKE 721 919 - -
Tpr2g5867 1283 PANTHER TMV RESISTANCE PROTEIN N-LIKE 18 707 - -
Tpr2g5867 1283 Pfam TIR domain 11 182 IPR000157 GO:0007165
Tpr2g5867 1283 Gene3D - 346 430 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5867 Tpr-Chr2 70255246 70262469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5867 12 795 WRKY Transcription Factor Family AT4G12020 30.863 2.78e-91 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5867 - - mtr:MTR_3g080470 2041.54