Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5857 ATGGAGTCTTATTGCATCCTATGTTTGCCCTCTGCAGTTGCATCTTTTCTTCTCATCGCTTCTTCTTCCCTTTCATTTTCACACTCTTCTTCACTCCTTGGCGTTCATCCTCTAGATGAGAAATATTATAGCTCTCAGTTCATCAAGTGTAAGGATGGATCCAAATCCTTTTCTAGAGACCACCGTCTCAATGACAATTTCTGTGACTGCTCTGATGGCACCGATGAACCTGGAACTTCAGCTTGTCCAGCAGGAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACAGTTTATAGTTTCTTCCCATGTTAATGATCGTTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAACCATTCATTGTCCCAACACATGTGTTATGGGTGGCAATGCAGAAAACATGTATGGGAATTATAATTCAAAAGCAAGTGATCAGGGCATTTTTCCTGGAAAAGAAGCAAAAGATGAAGCGAAATCAGAGGAATCAGTTTATAACCTTAATGGCTTAAAGCTGGCAATTATTCTACAAGTGGTTCTAGTTGTTTTTCTGGTATTTCTCTGGAGTTTTCGTTGCCACACCAGATATAGGAGGAGGCGTTCCCGCTGA 615 0.4081 MESYCILCLPSAVASFLLIASSSLSFSHSSSLLGVHPLDEKYYSSQFIKCKDGSKSFSRDHRLNDNFCDCSDGTDEPGTSACPAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTIHCPNTCVMGGNAENMYGNYNSKASDQGIFPGKEAKDEAKSEESVYNLNGLKLAIILQVVLVVFLVFLWSFRCHTRYRRRRSR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5857 204 PANTHER EXPRESSED PROTEIN 22 202 - -
Tpr2g5857 204 Gene3D - 78 129 IPR036055 GO:0005515
Tpr2g5857 204 Pfam Glucosidase II beta subunit-like 19 131 IPR028146 -
Tpr2g5857 204 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 22 202 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5857 Tpr-Chr2 69916653 69920250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5857 32 186 Calmodulin-binding Proteins AT5G56360 51.899 5.12e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5857 - - gmx:100306278 241.121