Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5834 ATGGATTTAACGTCCACTTCATCTGGAATTGGTGATATTCATTCGACTGGAGCATCTGGAAGTGAACCATTGACTTCATCTGATAGTTCTCAATGTTGCCACCCTGACATTAAGAAATCATGGGACACTTTAGTATTTCATTCTATTAAAGAGGTTGAAGATTTCTATGGTCAGTATGCATATAAAACTGGATTTTCAATCAGGAGTATGTTGAAGTCGAAGAATAATTCAAAGAATAAGAAGTCGGATAAGATACATTACATACGTTATGTTTGTAACAAAGAAGGTTTTAAGAAAGGAAGTTTGCTTAATCCGAACAACAAGCCAAGATCAGACAGTCCGGTTGTTATTGAATTTGAAAAAGTGAAAGAGAGACCGGAGGAAAGGATTGGTTGTAAAGCTGGAATATATCTGAAGTTGGATGAAGCATTGAATGTTTATAAGATATATAGATGGGAAGGGACACACTGTTATCCACTACATAGAAAAGAGCATCACTGTTACCTCAGATCATTCCGAGAAGTAAATGAAGTTCAAGGACAGCTTGCTTTAATTAATTCTAAAGCTGGAATGTCGATGAGGACGTCTTATGAAGTCATGGGTTAA 606 0.3614 MDLTSTSSGIGDIHSTGASGSEPLTSSDSSQCCHPDIKKSWDTLVFHSIKEVEDFYGQYAYKTGFSIRSMLKSKNNSKNKKSDKIHYIRYVCNKEGFKKGSLLNPNNKPRSDSPVVIEFEKVKERPEERIGCKAGIYLKLDEALNVYKIYRWEGTHCYPLHRKEHHCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5834 201 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 40 164 - -
Tpr2g5834 201 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 40 164 - -
Tpr2g5834 201 Pfam FAR1 DNA-binding domain 54 160 IPR004330 -
Tpr2g5834 201 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5834 Tpr-Chr2 69445959 69446564 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5834 FAR1 4.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5834 - - mtr:MTR_0558s0020 302.753