Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5830 ATGGAAGGTATGATGAAAGGAAATTCCAAGGGAAAATATGGATCTTCTTCTTCTTCTTCTCAAAAATCCACGAAAGAGAAGGAGAAACATCTGGTGGATAAGATTCAAGGGATTTTCACCAATCTTCAGTCTGCAAGAAAGGAAAGCAGAGCTAATGACATTGTGATCTGTGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGAAGGCGGAACTGGAGTCTCCAGCTACTTCCTTAGCTGATGGGAGCTTTGGTTCGTTTACCGGGGAACTAGCCCAACTGTTGCAAGAAATTGAGGAGAAAGATGATGCAACAAGTTCATTTACAAGCCCCGTGCCACTGAAGACTGGTCTCCATCAAAATAACATTAGTGATGGCAATTATCCATTTTTTCTGGAGAATTGTTTTGAGAATAACCAGACACTAGATCATACTTTTAAAGGCTCTGCTTCATCTCTGTTCAACAGTCCTTTAAATAACTCAGACATGGCTCAGTTGGATTTTCATCAATTCGGTTTAAATCAAGATATGGATCACAACGCTGTAGGTCACAACTCTGATTTGATTGGTCGGTTTAATTTGTATCAGGACCAAAGCCTCGGGCACAACACAGAAATAAAAAACTCAGAGTCAACTCAATTTAGTTTTGAAGAAGGCATTGATTGTTCTCAATTTTTCGGAGATAATGACACCACAACATTTGGAGACAATCTTATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCCTATCCCCAAAATGTGCACTGTGGGACTGTATCAGACCTGCTCAAAAACAGTGCCAGGGCTACTGTTGTAGTTCTCATGAGCATTTGGCAATTAGTGAAGGTCTCCCTGGAATGACTCCAATTTTGCGACCTGGTGGCATTGATGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACAATGGGAAAAGAAGTAGGCATCCCTAAGTGTGAAGGTGCTGCTTCAACGAAAGCCCCCTGGAATGCTTCAGAGTTCTTTGACATTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCGTTCGACAGTGGAACTAGGAAACAGAGATCACTCCCTGATTACCATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACACGGTGGACAAAAGAGATCCTATTACATGGACCCCCAACCTCCTAATCGTGATTGGCATTTGTACGAGTATGAGATCAATAGCCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCCAAGGGAAAAGTGTCTAAGGATTCTCTTAATGATTTGGAAAACAAGATGGGAAAGCTAACAGCTGCTCCATTGCCAGACAATGGAAAATCTATCGAGGGAAAAACTGATGCCAAGTCTGAGAATGTTGGCCTGCCTGCCTGA 1461 0.4244 MEGMMKGNSKGKYGSSSSSSQKSTKEKEKHLVDKIQGIFTNLQSARKESRANDIVICEEQMHQLLREWKAELESPATSLADGSFGSFTGELAQLLQEIEEKDDATSSFTSPVPLKTGLHQNNISDGNYPFFLENCFENNQTLDHTFKGSASSLFNSPLNNSDMAQLDFHQFGLNQDMDHNAVGHNSDLIGRFNLYQDQSLGHNTEIKNSESTQFSFEEGIDCSQFFGDNDTTTFGDNLIPNILPNICPPPSAFLSPKCALWDCIRPAQKQCQGYCCSSHEHLAISEGLPGMTPILRPGGIDVKDGPLFAAVLAKTMGKEVGIPKCEGAASTKAPWNASEFFDISFLEGETVREWLFFDKPRRAFDSGTRKQRSLPDYHGRGWHESRKQVMKEHGGQKRSYYMDPQPPNRDWHLYEYEINSHDGCALYRLELKLVDKKKSPKGKVSKDSLNDLENKMGKLTAAPLPDNGKSIEGKTDAKSENVGLPA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5830 486 MobiDBLite consensus disorder prediction 439 453 - -
Tpr2g5830 486 MobiDBLite consensus disorder prediction 367 398 - -
Tpr2g5830 486 PANTHER TRANSCRIPTION FACTOR VOZ1 5 480 IPR039277 GO:0006355|GO:0048578
Tpr2g5830 486 MobiDBLite consensus disorder prediction 439 486 - -
Tpr2g5830 486 MobiDBLite consensus disorder prediction 367 399 - -
Tpr2g5830 486 PANTHER TRANSCRIPTION FACTOR VOZ2 5 480 - -
Tpr2g5830 486 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5830 Tpr-Chr2 69400339 69414815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5830 18 461 VOZ-9 Transcription Factor Family AT1G28520 50.661 2.20e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Tpr2g5830 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5830 - - mtr:MTR_4g079240 703.36