Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5819 ATGGACTCTATCACCGGAGGTCCGTCTCCCGTTAACTTTGCTCCGCCGCGTCCTCCGTCGTCATCGCCGTTCCTCGGCCGGGAAGACTGTTGGAGCGAGGACGCAACTTCCACCCTCGTCGACGCCTGGGGAGAGCGCTACGTCGACCTCAACCGTGGTAACCTCCGTCAGAAGCACTGGCAAGAGGTTGCCGACGCCGTCAACGACATCCACGCCGCCGGCAACAACAGGAAAGCACGACGGACCGACGTTCAGTGCAAAAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCCGAATCCGACGGCGGTTACCAGAGTCCCTGGCCATTTTTCTCTCGTCTCGACATGCTCATCGGCGATACTTTCCCGGTAAAAAAACTCTCACCGCCGGCAACCGTACGCACCACCCCTTCCGCCGTAAAACCACCTCTGCCTCCGCCGGCGTGGATTATCTCTCATCCGGTAGGTCCCCGATCTGGAACGCAGAAACGTCCGGCACTGATGAACAGAGACGACACATCTTTCCGGCGGAATTTCTCAGCCTTCGCGGCGGCTGCTGCTGCTGCGGCAGAGGCGGAAAGCGGGGAGTCAGAGGAAAGGAGGTCGAGCATTGGAACAGGAAGCGGCGGCAAGAAGGTAAAGGAAAGTGATCGGAATATGGAGTTTGGTTACAGAGAGCTTGCTCAGGCTATAGAGAAGTTCGGCGAAGTATATGAGAGAGTTGAAGCTTCGAAACAGAAGCAAATGGTGGAATTGGAGAAGCAGAGGATGCAATTTTTGAAGGATTTGGAGTATCAGAGAATGCAGCTATACATGGAAACACAGGTTTATCTTCATAAAACCAAGCGCACCAAGCGTTCTTCTGGTTCCGCAGACAGTTTCTCGTAG 909 0.5468 MDSITGGPSPVNFAPPRPPSSSPFLGREDCWSEDATSTLVDAWGERYVDLNRGNLRQKHWQEVADAVNDIHAAGNNRKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFSRLDMLIGDTFPVKKLSPPATVRTTPSAVKPPLPPPAWIISHPVGPRSGTQKRPALMNRDDTSFRRNFSAFAAAAAAAAEAESGESEERRSSIGTGSGGKKVKESDRNMEFGYRELAQAIEKFGEVYERVEASKQKQMVELEKQRMQFLKDLEYQRMQLYMETQVYLHKTKRTKRSSGSADSFS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5819 302 MobiDBLite consensus disorder prediction 1 27 - -
Tpr2g5819 302 Gene3D - 31 99 - -
Tpr2g5819 302 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 8 297 - -
Tpr2g5819 302 MobiDBLite consensus disorder prediction 197 224 - -
Tpr2g5819 302 Pfam Myb/SANT-like DNA-binding domain 28 123 IPR044822 -
Tpr2g5819 302 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 297 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5819 Tpr-Chr2 69056743 69059886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5819 26 290 Trihelix Transcription Factor Family AT3G14180 36.207 5.16e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr2g5819 Myb_DNA-bind_4 1.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5819 - - lang:109355153 379.407