LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g5817	ATGGAGGGGACACAAGAAGATGCACGGCTGGAAGAGCAAAGGCAATCCAATGTGTCACGGTGGACTTCAGATTTTGTTGGAAAATTTGGATCTGTTTCTTTGGAAACTCAAGATGAGACCTTAAATAATAAAGAATCACCAAGACATTCTAACCAAGATTTTATGTCACCTCAGAGGGCATCACAAATTCTATGGCACACTGGAATGCTATCAGAACCGATACCAAATGGTTTTTACTCAGTTGTTCCGGAAAAAAGGCTCAAAAAACTTTTTGATAGTATTCCTACTTTGGATGATCTTCAAGCTTTAGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAAAGAAAGATAGAAAGTTATCTATGTTGAAGCAACTAATTGTCACATTGGTTAAAGGGTTGAATGCAAATCCAGCTGCAATAATTAAGAAGATAGCTGTATTAGTTTCTGATTTCTATAAGCGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCGCACATGTTTGAGAGTCACGGTATCCAGATGCTGGGGCAAATAAGACATGGTTCATGCCGTCCTCGAGCCATCTTATTTAAAGTATTGGCAGATACTGTAGGTCTTGAAAGTAAGCTTATGATGGGTTTTCCAACTGATGGGGCTGCCGATTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAGACTCTGTGGAACTGCTGGTTGATCTTATGCGCTTTCCTGGCCAATTGTTACCTCGATCAATCAAGTCAATTCTTATGACACACATTTCCGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAGTCCCCCTTACAGTGCTGAAAAAGATGAGAATCTCCAATTTCATAGAAGATTTGAAGCATCTTTAAATGTATCAGGTCCTCCCTTGCGAAACATGATGTTACGATCAAATACCATGGACAGGAAACTAAGTTTGTCTCATAGTGAACCAAACATTGCAACTTCATTTGGTCGGCGTAGTCGAAGAAAGGTCTTTGCTGAACAGAGGACTGCTAGCTCAAGTCCCGAACATCCATCATTTCAAGCTCGTGGACAGTCCAAGCTTGGCGGTGACAAGACTGCATTTAGAGATTTTGCTGATGACCAGGCTACGTCAAGATCAAGCTATAAATCAGATGGTGCATCCTCATCAGAAACTCGTAGAATACGAAGAAGAAGCCTCAGTATTACACCAGAGATCGGTGATGATATTGCAAGGGCTGTGCGAGCAATGAATGAAAAACTAAAGCAAAATCGTCTTCTAAAGGAACAAGGGGATGACAGTTCTCTGTCTCATTCTCCCAGTGATAGAATTAGCAGTGCGGAGCTTCAGAAAAATCTGTCAAATTTCTGTCTTGATGGTCATCATGAAACGTCCCCCTTATTTCCGCTGCACCGTGACAATATAACTTCGAAGGCAATGTCATTACCCTCTTCACCACATGATTATCGAGGACAAACTTCTGAGACAAGCAGGCCGTCGGGATATGAATTGAGTGATGAACTGGAGTCAACTTGGAATAAAATCCTTGAATCGTCAATGGCGAATAATAATCCTCTGTTACCATATGAAGAATGGAATATTGATTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATCGGGTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTTTGCAATGAGATATCCATTCTCAGCCGACTCAGACATCCTAATGTCATCTTATTTCTGGGCGCATGCACAAAGCCACCACGCTTGTCAATGGTGACCGAATATATGGAAATGGGATCTTTGTTCTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGTTGGCGAAGAAGACTAAAGATGCTGCGTGACATATGCAGGGGATTGATGCATATACATCGAATGAAGATTATTCACCGTGATGTGAAAAGTGCAAATTGTCTTGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTCGGACTGTCGAGAATAATTACAGATTCTCCCATGAGAGATGGTTCTTCAGCTGGAACACCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCGTGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATACTGTTGCTAATGAGGGTTCCAGATTGGAGATTCCCGAAGGCCCACTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGAATGAGCGACCAAGTTGTGAGGAGATCCTATCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA	2454	0.4226	MEGTQEDARLEEQRQSNVSRWTSDFVGKFGSVSLETQDETLNNKESPRHSNQDFMSPQRASQILWHTGMLSEPIPNGFYSVVPEKRLKKLFDSIPTLDDLQALGGEGFRADVIVVDAKKDRKLSMLKQLIVTLVKGLNANPAAIIKKIAVLVSDFYKRPNVESPAKAALEESSHMFESHGIQMLGQIRHGSCRPRAILFKVLADTVGLESKLMMGFPTDGAADCVDSYKHMSVIVVLDSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESPPYSAEKDENLQFHRRFEASLNVSGPPLRNMMLRSNTMDRKLSLSHSEPNIATSFGRRSRRKVFAEQRTASSSPEHPSFQARGQSKLGGDKTAFRDFADDQATSRSSYKSDGASSSETRRIRRRSLSITPEIGDDIARAVRAMNEKLKQNRLLKEQGDDSSLSHSPSDRISSAELQKNLSNFCLDGHHETSPLFPLHRDNITSKAMSLPSSPHDYRGQTSETSRPSGYELSDELESTWNKILESSMANNNPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDSPMRDGSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPNERPSCEEILSRLVDIEYSMS*	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	362	376	-	-
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	503	524	-	-
	Tpr2g5817	817	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	680	692	IPR008271	GO:0004672\|GO:0006468
	Tpr2g5817	817	ProSiteProfiles	Protein kinase domain profile.	561	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g5817	817	Coils	Coil	432	452	-	-
	Tpr2g5817	817	SUPERFAMILY	Protein kinase-like (PK-like)	536	809	IPR011009	-
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	337	422	-	-
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	447	466	-	-
	Tpr2g5817	817	SMART	serkin_6	561	810	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g5817	817	Gene3D	Transferase(Phosphotransferase) domain 1	640	816	-	-
	Tpr2g5817	817	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	27	815	-	-
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	36	56	-	-
	Tpr2g5817	817	PANTHER	MAP KINASE KINASE KINASE-LIKE PROTEIN	27	815	-	-
	Tpr2g5817	817	MobiDBLite	consensus disorder prediction	395	410	-	-
	Tpr2g5817	817	Gene3D	Phosphorylase Kinase; domain 1	554	639	-	-
	Tpr2g5817	817	CDD	STKc_MAP3K-like	567	809	-	-
	Tpr2g5817	817	ProSitePatterns	Protein kinases ATP-binding region signature.	567	588	IPR017441	GO:0005524
	Tpr2g5817	817	Pfam	Protein tyrosine and serine/threonine kinase	562	809	IPR001245	GO:0004672\|GO:0006468
	Tpr2g5817	817	Pfam	Ethylene-responsive protein kinase Le-CTR1	58	253	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g5817	Tpr-Chr2	69010016	69022462	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g5817	1	816	MAP Kinase Kinase Kinase	AT3G58640	69.045	0.0	1141

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Tpr2g5817		PK_Tyr_Ser-Thr	6.5e-62	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g5817	-		-	gmx:100807193	1392.1