Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5814 ATGGAAATTCTTGGTTTCATGATTATTATAGTTTCCTATATACTTATTTACTCTATCAAATTTTCCATAGCAGCTGATTCTCTTGGTTTGTCACAATCAATCAGCAATAATAATAATAATACCTTAGTGTCCAAAAGTGGAAGATTTGAACTTGGTTTCTTCACTCCAGGTAACTCTAACAAAACTTACCTTGGTATTTGGTACAAGAACATTCCTGTTCAAAATATTGTTTGGGTTGCAAACAGACTCAATCCCATCAATGGTACTTCAAATTCAAACTACATATTACAACTCAACAGCACAGGTAACCTTGTCCTCGCTCAAAATAGCTCCTTTGTTTGGTACACAACAACAGACCAAAAACAAGTGCATAATCCAGTTGCAGTGCTCTTAGACAGTGGCAATCTTGTAGTAAGAAATGAAGGAGAAACAAACCAAGAAGAGCAGTATTTATGGCAGAGTTTTGATTATCCATCAGATACCTTTTTAGAAGGAATGAAATTGGGAAGGAATCTAAGAAATGGTCATGATTGGAAATTAACATCTTGGAAGAGTCCTGAAGATCCATCCATAGGAGATGTTAGTTGGGGTTTAGTACTCAATGATTATCCTGAGTATTATATGATGAATGGAAGTGAAAAAGTTTTCAGGATTGGACCATGGAATGGTTTACACTTTAGTGCATTGCCAGAACAAGTTTCAAACTCATTCTTACATTACCAGATTGTTTCCAACAATGATGAAATCTTCTATTCATATAGCATCGAGATCAATACCGTTATCTCAAAAGTAGTAGTCGAGCAAACAAAACAACATCGTTATGTATGGGATGAACAAGAACATAATTGGAGGACATATGTAACACTTCCCAAAGATTTTTGTGACACTTATGGTCTTTGTGGACCCTATGGAAATTGCATAATGACACAACAACAGGTTTGTCAATGTTTCAATGGGTTTAGTCCAAAGTCACCACAAGCATGGATAGCATCTGATTGGAGTCAAGGATGTGTGCGCGATAAACATTTGAGTTGCAATCACAATCATACAAATAAAGACGGGTTTGTCAAATTTCAAGGCTTAAAAGTTCCAGATACTACACATTCTTGGTTGAATGTTAGCATGAATCTTGAGGAATGCAGAGAAAAATGTTTAAAAAATTGTTCTTGTATGGCTTATACAAATTCAAACATAAGTGGAGAAGGGAGTGGTTGTGTTATGTGGTTTGGTGATCTAATTGACATACGACAGTTTCAAGATGCCGGGCAAGATCTCTATATCCGGATGTTTGGTTCAGAGTTAGTCAACAGTGAAGAACCTAACCATATGCACAAAAGGAACAACACAGCGGCCATAGTAGCCACCACTGTTATTTTAATTTTTGGGGTGCTTTTGGTGTGTATTTATTTAATCTGCAGAGTCCAGAAGAAGACTGTAGACAGATCAGAAAGGCATGTAGATGATCTTGATCTCCCATTGTTTGATCTGCCAACAATTTCCACTGCAACTAATGGCTTCTCCAAAAACAATAAAATTGGCAAAGGTGGTTTTGGAACTGTGTATAAGGGAAAATTAACCAGTGATCTAGAAATTGCTGTTAAGAGACTTTCAAGCATTTCGGGACAAGGAATGACCGAATTCATAAATGAAGTAAAGTTAATAGCAAAACTTCAGCACAGAAATCTAGTAAAGCTACTAGGTTGTTGCATTGAAGGGGAACAAATGTTGATTTATGAATACATGGCTAATGGTAGCCTGGACTCCTTCATTTTTGACACTGCCAAGAGTAAATTGTTAGATTGGCCAAAACGGTTCAATATAATTTGTGGAATTGCTAGGGGGCTTCTGTATCTTCACCAAGATTCTCGATTAAGGATTATCCATAGAGACCTCAAAGCAAGTAATGTTTTACTCGACGATAGTTTGAATCCAAAAATATCCGATTTTGGAACAGCTAGAACTTTCGGAGGAGACCATTACGAAGGAAATACAAAGAGAATAATTGGGACTTATGGGTACATGGCACCGGAGTATGCTGTTGATGGATTGTTTTCAGTGAAATCTGACGTTTTTAGCTTCGGAATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGAACTCTTAACCTTGTTGGCCAAGCATGGTCAGTATGGAAAGAGAATAGAGCTTTAGAGTTGATTGACACAAACATAGGTGAGACTTTTGTTGTATCGGAAGTGTTGCGTTGTATGCACGTTAGTCTCTTGTGTGTACAGCAGAATCCTGAAGATAGGCCTACAATGGCCTCTGTGATTCTAATGTTGGGGAGCACTGAGATGGAATTAGGGGAGCCTAAAGAACCTGGTTTCATTTCCAAAAATGTTTCAACAGAGTCAAATTCGTCGACCAATGCAAAGGATTGTAGTTCAGTAAATGAAGTGACCATTTCCTTATTAGATGCTAGATGA 2472 0.3714 MEILGFMIIIVSYILIYSIKFSIAADSLGLSQSISNNNNNTLVSKSGRFELGFFTPGNSNKTYLGIWYKNIPVQNIVWVANRLNPINGTSNSNYILQLNSTGNLVLAQNSSFVWYTTTDQKQVHNPVAVLLDSGNLVVRNEGETNQEEQYLWQSFDYPSDTFLEGMKLGRNLRNGHDWKLTSWKSPEDPSIGDVSWGLVLNDYPEYYMMNGSEKVFRIGPWNGLHFSALPEQVSNSFLHYQIVSNNDEIFYSYSIEINTVISKVVVEQTKQHRYVWDEQEHNWRTYVTLPKDFCDTYGLCGPYGNCIMTQQQVCQCFNGFSPKSPQAWIASDWSQGCVRDKHLSCNHNHTNKDGFVKFQGLKVPDTTHSWLNVSMNLEECREKCLKNCSCMAYTNSNISGEGSGCVMWFGDLIDIRQFQDAGQDLYIRMFGSELVNSEEPNHMHKRNNTAAIVATTVILIFGVLLVCIYLICRVQKKTVDRSERHVDDLDLPLFDLPTISTATNGFSKNNKIGKGGFGTVYKGKLTSDLEIAVKRLSSISGQGMTEFINEVKLIAKLQHRNLVKLLGCCIEGEQMLIYEYMANGSLDSFIFDTAKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDSLNPKISDFGTARTFGGDHYEGNTKRIIGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWSVWKENRALELIDTNIGETFVVSEVLRCMHVSLLCVQQNPEDRPTMASVILMLGSTEMELGEPKEPGFISKNVSTESNSSTNAKDCSSVNEVTISLLDAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5814 823 CDD STKc_IRAK 512 776 - -
Tpr2g5814 823 SMART blect_4 33 158 IPR001480 -
Tpr2g5814 823 Gene3D - 21 155 IPR036426 -
Tpr2g5814 823 Pfam PAN-like domain 349 415 IPR003609 -
Tpr2g5814 823 Gene3D Hepatocyte Growth Factor 346 427 - -
Tpr2g5814 823 SMART ntp_6 350 429 IPR003609 -
Tpr2g5814 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 189 IPR036426 -
Tpr2g5814 823 CDD PAN_AP_plant 342 428 - -
Tpr2g5814 823 Pfam Domain of unknown function (DUF3403) 778 823 IPR021820 GO:0004674
Tpr2g5814 823 ProSiteProfiles PAN/Apple domain profile. 345 430 IPR003609 -
Tpr2g5814 823 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
Tpr2g5814 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Tpr2g5814 823 CDD B_lectin 41 158 IPR001480 -
Tpr2g5814 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 820 - -
Tpr2g5814 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Tpr2g5814 823 SUPERFAMILY Protein kinase-like (PK-like) 486 776 IPR011009 -
Tpr2g5814 823 Gene3D Phosphorylase Kinase; domain 1 470 580 - -
Tpr2g5814 823 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Tpr2g5814 823 PANTHER - 29 820 - -
Tpr2g5814 823 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Tpr2g5814 823 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Tpr2g5814 823 Pfam D-mannose binding lectin 76 184 IPR001480 -
Tpr2g5814 823 Pfam Protein tyrosine and serine/threonine kinase 508 773 IPR001245 GO:0004672|GO:0006468
Tpr2g5814 823 SMART serkin_6 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5814 823 Gene3D Transferase(Phosphotransferase) domain 1 581 789 - -
Tpr2g5814 823 ProSiteProfiles Protein kinase domain profile. 506 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5814 Tpr-Chr2 68892253 68895902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5814 451 795 Receptor kinase-like Gene Family AT4G23190 53.977 1.96e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g5814 PK_Tyr_Ser-Thr 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5814 - - mtr:MTR_4g081730 1116.29