Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5787 ATGGCGAGCGAGGACACTGTTGCCACATGTGTGACATTATTGCTGGCAATTGAAACAAGAGATACAATTGCCAAATTTATTTATGCAAGCTTGTTTGAATGGCTTGTACAACAAGTTAACAAGTCACTTGCAGTGGGTGAAAACCATACAGAGAAATTCATTAGTATCCTTGCTTTTTATGTGTTTCAGCCATTCCAGGGTAAGGGGACATATAAGAATGATAAGGCTGGATTGACACTTGCTGATCTTGCTTACCGACGTGCAAAAGCAGTAAAGGCCACCAAGAGGGCACTAGACTCTGGCAAGATTGTGAAGAATCATCAAAAGAAATCTAATAAATCTAATCCTTTGCCAAAACCTTCCTCTTCCAGGCTAGAGGAAATGCGGGAGCTATTCCAGACTGGCGTGAAGGATAAAAAGCCGAAATGGAGAGGTTCTTGA 441 0.4172 MASEDTVATCVTLLLAIETRDTIAKFIYASLFEWLVQQVNKSLAVGENHTEKFISILAFYVFQPFQGKGTYKNDKAGLTLADLAYRRAKAVKATKRALDSGKIVKNHQKKSNKSNPLPKPSSSRLEEMRELFQTGVKDKKPKWRGS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5787 146 MobiDBLite consensus disorder prediction 102 146 - -
Tpr2g5787 146 PANTHER MYOSIN-2 ISOFORM X1 2 66 - -
Tpr2g5787 146 MobiDBLite consensus disorder prediction 123 146 - -
Tpr2g5787 146 Pfam Myosin head (motor domain) 4 66 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g5787 146 Gene3D Myosin VI head, motor domain, U50 subdomain 1 65 - -
Tpr2g5787 146 PANTHER MYOSIN 2 66 - -
Tpr2g5787 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 66 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5787 Tpr-Chr2 67881880 67883958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5787 5 65 Myosins gene family AT1G50360 55.738 5.30e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5787 - K10357 gmx:100802074 83.5741