Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5769 ATGACTGATTCACACTCAATTAATGTTGAATCATCACCTAAGCTTGAATTATATGCTAAACAAACTAAAAATATAACCTATGAAGCTCAACACTCTCCATCTAGCATCCAAAAGGCTATTGCTGAATTGGTGGGAACATACATTCTTATATTTGCTGGTTGTGGAGCCGCTCTTGTCAACGAGAGGTTACAAATCACTGTAGTTGGCATAGCAATTGTTTCAGGCTTAGCTCTAACCGTCGCTATATATTCGGTTGGTCACGTCTCTGGTGGTCATTTCAATCCTGCTGTCACAATTTCCTTAGCCGTTGTCCGAAAAATTCAATTGAAACTTGTGCCTGTTTATTTGGTGTGTCAGTTGATGGGTGCTACAATGGCCACGCTCACCCTCAAAGTGTTGTATCATGAAAAGGTGTCAATTGGAGTAACATTGACTCGATACTCAAATTCAACTTCTGATCTTGAGGCATTGGTGTGGGAATCCATAATCACTTTCATACTCATGCTAACTATTTGTGGTGTTGCCACTGATCACAGAGGGAGCAAAGAACTTGCTGGAGTTGCAATAGGCCTTTCAGTTCTGATTAATATTATCATTGTCGGGCCTATAACCGGAGCATCGATGAATCCAGGAAGGAGTTTGGGCCCTGCCATAGTATCAGGCAATTACAAAAATATTTGGGTTTATATCATAGGTCCAATTATTGGAGCAGTCTTTGCAAGTGTGCTTTATACTTTCCTAAGAGTTACAAAACCAGCTCAACCAGAACAATCTCATGTGTGA 783 0.4049 MTDSHSINVESSPKLELYAKQTKNITYEAQHSPSSIQKAIAELVGTYILIFAGCGAALVNERLQITVVGIAIVSGLALTVAIYSVGHVSGGHFNPAVTISLAVVRKIQLKLVPVYLVCQLMGATMATLTLKVLYHEKVSIGVTLTRYSNSTSDLEALVWESIITFILMLTICGVATDHRGSKELAGVAIGLSVLINIIIVGPITGASMNPGRSLGPAIVSGNYKNIWVYIIGPIIGAVFASVLYTFLRVTKPAQPEQSHV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5769 260 PANTHER MAJOR INTRINSIC PROTEIN 1 258 - -
Tpr2g5769 260 TIGRFAM MIP: MIP family channel proteins 41 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 CDD MIP 37 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Tpr2g5769 260 PANTHER AQUAPORIN NIP2-1 1 258 IPR034294 -
Tpr2g5769 260 SUPERFAMILY Aquaporin-like 30 253 IPR023271 -
Tpr2g5769 260 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr2g5769 260 Gene3D Glycerol uptake facilitator protein. 3 259 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5769 Tpr-Chr2 67373380 67376035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5769 32 252 Major Intrinsic Protein MIP AT5G37820 49.782 2.09e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5769 K09874 - gmx:100798380 387.497