Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5739 ATGACAGTTGAACTCATAATGGAATACAGAAACAATAAATTCCAAGAGAATGCAGTTGAAGAAGCTGCTTCTGGTTTACAAAGCATAGACAAACTCATTAAACTGCTATCTTCAAATTCAAAGTCTAACTCCATGGAATTCATTGAAATTGATCAAATGGACTACAAAACAGTTGCTGATGTAGCTGTTTCAAAGTTTAAGAATGTTATTTCACTTTTGAATAATCAAAACAGAACAAGAACTGGTCATGCTCGTTTCAGAAGAGCACCTTTACCTTCTTCTTCTACAACCCTTTCTGAAACTATAGTCTACCATGCTACTCCGTTGCAGCAGATCCCACCTCTAGCTCCCAAAACTATCATTGATTTTTCTCATAATTCCTCTGCTAATTCATTCATGTCTTCCTCATGTTCATTGAAGAAAAAGTGTAGTAGTTCCTCTGGCCACTGTCATTGTTCAAAGAAGAGAAAAATGAGGTTGAGAAGAGTGGTGAGGGTAGCGGCCATAAGCTTGAAGATGGCTGATATTCCAACTGATGATTATTCTTGGAGGAAATATGGTCAAAAACCCATTAAAGGATCACCTCATCCAAGGGGCTATTACAAGTGTAGCAGTGTAAAAGGTTGTCCAGCTCGGAAACATGTAGAAAGAGCTTTGGATGATTCATCTATGTTGGTAGTTACTTATGAATGA 693 0.3752 MTVELIMEYRNNKFQENAVEEAASGLQSIDKLIKLLSSNSKSNSMEFIEIDQMDYKTVADVAVSKFKNVISLLNNQNRTRTGHARFRRAPLPSSSTTLSETIVYHATPLQQIPPLAPKTIIDFSHNSSANSFMSSSCSLKKKCSSSSGHCHCSKKRKMRLRRVVRVAAISLKMADIPTDDYSWRKYGQKPIKGSPHPRGYYKCSSVKGCPARKHVERALDDSSMLVVTYE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5739 230 Pfam Plant zinc cluster domain 139 175 IPR018872 -
Tpr2g5739 230 Gene3D WRKY domain 157 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g5739 230 ProSiteProfiles WRKY domain profile. 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g5739 230 SUPERFAMILY WRKY DNA-binding domain 174 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g5739 230 SMART WRKY_cls 177 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g5739 230 Pfam WRKY DNA -binding domain 179 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g5739 230 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 117 IPR044810 GO:0003700
Tpr2g5739 230 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 123 230 IPR044810 GO:0003700
Tpr2g5739 230 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 12 117 - -
Tpr2g5739 230 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 123 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5739 Tpr-Chr2 66576581 66578859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5739 1 89 WRKY Transcription Factor Family AT2G24570 42.857 3.92e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g5739 WRKY 7.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5739 - - mtr:MTR_5g016610 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5739 2 66576581 66578859 Tpr2g5739 2 66576581 66578859 ECH
Tpr2g5739 2 66576581 66578859 Tpr2g3392 2 37422339 37423973 PCT
Tpr4g4007 4 46615978 46618005 Tpr2g5739 2 66576581 66578859 PCT