Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5734 ATGGAACCGGCATCTGCTGTAACTCCTCCAGTTTCTAACACTGAACATTCCTCCACCAAAGTATCTGCTGAAAATAGCAATGAACATGATCTGCCGTCCCTGTCACCAACTTCTGGTATATCTTCCTGGGAAAGAAATCCGAGGCTCGGGGTAGCAGATCAGAACTCACAGACTGAGAACAGTAGTATGTCTGCATTTGCTGTAACTCCAGCATTGATGGAACCGGCATCTGCTGTAATGCCTCCAGCTTCTAACACTGAACATTCCTCCACCAAAGTATCTGCTGAAAATAGCAATGCACGTGATTCACTGTCCTTCTCACCAACTTCTGGTATATCTTCCTGGGCACGAAATCTGAGGCTCGGGGCAGCAGATCAGAACTCACAGACTGAGAACAGTGGTTTTTCTGCATTTGCTCGCCTGGCAAGCGGGATTGGACTACGAAGTCCCTCAAATGAGGCTGCTCCAGGCAACTCAGGAACTGAGCAATCTAATTTAATTACCCTTGAATCATTCACCAAAGGGTTGGTGGACTCTTCTAAGAGCGCAGTAAAGGCGATGCAGACCAAAGCACGACATATTGTCTCTCAAAATAAACGCAGATACCAGGAAGGTGGATTTGATTTGGATATGACATACATAACTGAAAATATAATAGCTATGGGATTTCCTGGTGGTGATTTAAGCTCTGGAATTGTTGGGTACATTGAGGGGTTCTATCGCAATCACATGGACGAAGTAATCAAGTTCTTTGAAACTCATCATAAGGGAAAGTATAAAGTATACAATCTTTGTTCAGAGAGGTTGTATGATGGATCACTTTTCCAGGGGAAGGTTGCAAGTTTCCCATTTAGTGATCACAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATCCAAAATGTGGTAGTTGTTCATTGTAAAGCTGGTCTGGGAAGGACAGGACTGATGATTTGTAGTCTTCTTTTGTTTCTTAAGTTCTTCACCACTCCTGAGGAAGCCATTGGTCACTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAAAGGACTTTAACACACTTCAATGGAGAAGTCCACCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGCCCTTATTGGGTTAGGCCATCCATTACAATTTCTGATCATAGTGGAATTCTTTTCACAACAAGAAAGCATCCCAAGACAAAGGATCTAATGCCTGAAGATTTCTGGATCAATGCACCAAAGAAAGGAATTATGGTCTTTGCATTACCAGGGGAGCCTGGTCTGGCAGAATTGGTTGGGGACTTCAAAATTCATTTTCATGATCGACAGGGAGATTTCTTCTGTTGGATGAATACAACAATGATAGAGAACAGAACAATTTTAGATGGCTCGGATCTTGATGATTTTGATAAGAGAAAGATCCCCACTCCAGGGTTCCAGGTCGAAGTTGTGATGGTAGACTATGATGGCACCCTTCCCACTAAAGTCAATCCTGCAAGCAAAGGATCTGGCAACACAAGCAATGTCTTATCTGGTGCAAAGTCTACATCTAATTCAAGCAAGAGTAAGGTACCTACAAATGGAGATGATGATGTATTCTCAGATAGTGACGAGGAGGAGACCAAGGGAACAAAAAGGAGGGAAGCTGCAACTGATTACAAGTATACGGAACCGCATCAAGTATCTGAGGCTACTACTGACCATGTAGGGATGTTGGCAAATGCAACGGATCGGTTGTCAATCCAGCATGAGGAACGTACAGAAAACAATGCTTCTGAAGCATCAACTACAGATAAAATTCATAGTACTCATGCAGGCCCTAACACAACCAACACGGAATCTTTAGGGTCAAGTGAATTTAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCGTTTGGAGATGAAGATTTTGAGAGTGATTAA 1998 0.4264 MEPASAVTPPVSNTEHSSTKVSAENSNEHDLPSLSPTSGISSWERNPRLGVADQNSQTENSSMSAFAVTPALMEPASAVMPPASNTEHSSTKVSAENSNARDSLSFSPTSGISSWARNLRLGAADQNSQTENSGFSAFARLASGIGLRSPSNEAAPGNSGTEQSNLITLESFTKGLVDSSKSAVKAMQTKARHIVSQNKRRYQEGGFDLDMTYITENIIAMGFPGGDLSSGIVGYIEGFYRNHMDEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGLGRTGLMICSLLLFLKFFTTPEEAIGHFNQKRCVDGKALVLPSQIRYVKYFERTLTHFNGEVHPGRRCMLRGFRLHKCPYWVRPSITISDHSGILFTTRKHPKTKDLMPEDFWINAPKKGIMVFALPGEPGLAELVGDFKIHFHDRQGDFFCWMNTTMIENRTILDGSDLDDFDKRKIPTPGFQVEVVMVDYDGTLPTKVNPASKGSGNTSNVLSGAKSTSNSSKSKVPTNGDDDVFSDSDEEETKGTKRREAATDYKYTEPHQVSEATTDHVGMLANATDRLSIQHEERTENNASEASTTDKIHSTHAGPNTTNTESLGSSEFKAIAADASVFSFGDEDFESD* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5734 665 MobiDBLite consensus disorder prediction 7 62 - -
Tpr2g5734 665 Gene3D Protein tyrosine phosphatase superfamily 185 382 IPR029021 -
Tpr2g5734 665 CDD PTP_PTEN 210 374 IPR045101 GO:0016791
Tpr2g5734 665 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 213 379 IPR029021 -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 1 62 - -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 563 579 - -
Tpr2g5734 665 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 314 353 IPR000387 GO:0016311|GO:0016791
Tpr2g5734 665 MobiDBLite consensus disorder prediction 80 109 - -
Tpr2g5734 665 SMART PTEN_C2_2 384 512 IPR014020 -
Tpr2g5734 665 ProSiteProfiles Phosphatase tensin-type domain profile. 200 379 IPR029023 -
Tpr2g5734 665 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 78 665 - -
Tpr2g5734 665 ProSitePatterns Tyrosine specific protein phosphatases active site. 316 326 IPR016130 GO:0016311|GO:0016791
Tpr2g5734 665 MobiDBLite consensus disorder prediction 608 642 - -
Tpr2g5734 665 ProSiteProfiles C2 tensin-type domain profile. 386 513 IPR014020 -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 521 593 - -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 82 109 - -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 521 554 - -
Tpr2g5734 665 MobiDBLite consensus disorder prediction 618 642 - -
Tpr2g5734 665 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 456 510 IPR035892 -
Tpr2g5734 665 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 78 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5734 Tpr-Chr2 66542749 66550080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5734 110 665 Protein tyrosine phosphatase (PTP) family AT3G19420 62.369 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5734 K01110 - gmx:100801622 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5734 2 66542749 66550080 Tpr2g5734 2 66542749 66550080 ECH
Tpr2g5734 2 66542749 66550080 Tpr1g0411 1 3510654 3516708 PCT