Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5728 ATGGAATACAACTTTCTTGTCTACATAATTTTCCCTTTCCTTTTTCTTATATCTATAAAATTATTATTATTTTCCAATAGAAGACTCAAAAAAATTCCACCATGCCCACCTTCTTTTCCCATAATTGGCAATCTCCATCAACTTAAACAACCAATTCACCTATATTTTCATGAACTCTCCCAAAAATATGGTCCTATTTTCACCCTTAAATTTGGGTCTCAACTTGTAGCCGTAGTTTCATCGGCGTCTATTGCCGAAGAATGTTTCACCAAAAATGATATTATTTTCGCAAACCGTATACACTCTCTTAAAACCAAGTATCTTGCTTTCGATAACACAAGCCTTATTACCTCATCGTATGGAGATCATTGGCGTAATTTACGTCGTATAAGCTCACTAGAAATTCTCTCTACTCACCGTCTCAACTCTTTTTCAGAAATCCGTAAAGACGAGACCATGAGGTTAGTTCGAGAACTTGCTAAGAACTCTAACAAAGACTTCACAAAAGTTGAGCTTAGATCTTTGTTTGCTGAGCTAACATTTAACACAATCATGAGAATGGTTTGTGGTAAACGCTTTTATGGTGATGAATCTGATGGAACAAACGCCGATGAGGCAAAGAAATTTCGAGATGTCATGAATGAGATTCAAGAGTTTGGGTTGGGATCCTATCTTGGTGATTTTGTGCCTTTATTCAGATTGTTTGATTTTAGTGGTTATAAGAATAAGTTAAAAAGGGTTGGAGAGAAGATGGATGCACTTTTTCAAGGACTAGTTGATGATCATCGTAAGAACAAAAAGGAAAATAAAAATACCATGATTGATCACTTACTTTCCTTACAAGAATCACAACCAGAATATTACAGCGACCAAATTATCAAAGGGCTTATTATGTCATTGATAGTTGCTGGAACAGAAACTTCCGCTATAACATTAGAGTGGGCGATGGCTAATTTGTTAAACCATCCAGATGTATTGGAAAAGGCAAGGATTGAATTGGACAATCACATTGGACAAGAGTGCTTAATTGAAGAAGAAAAAGCTACAAAATTACAATACCTTCAAAATATTATCTCTGAGACGCTGCGATTGCATCCGGCGGCACCAATGTTGATACCACATGTATCATCTGATGGTTGTACCGTGGGAGGCTATGATGTGCCTCAAAACACAATATTGATGGTTAATGCATGGGATATTCATAGGGACCCTAATTTGTGGGCTGATCCAACGAGCTTTAAGCCTCAGAGGTTTGAGAATAGTCAGCAAGCAGACATGCATGGCTTTATTCCTTTTGGTATGGGGAGGAGGTCCTGTCCTGGATCAGGATTATCCCTAAGAACTTTAAGCTTAACTCTGGGCTCGTTGATTCAATGTTTTGAGTGGAAAAGAGTTAACAATGAAGAAGTTAACATGACTGAAGGACGCGGAACGGTGATACCAATGGCCATTCCATTGGAGGCCCAATGCAAAGTGCGTCCAATAATCAATAACATTTTCTCTTAG 1506 0.3785 MEYNFLVYIIFPFLFLISIKLLLFSNRRLKKIPPCPPSFPIIGNLHQLKQPIHLYFHELSQKYGPIFTLKFGSQLVAVVSSASIAEECFTKNDIIFANRIHSLKTKYLAFDNTSLITSSYGDHWRNLRRISSLEILSTHRLNSFSEIRKDETMRLVRELAKNSNKDFTKVELRSLFAELTFNTIMRMVCGKRFYGDESDGTNADEAKKFRDVMNEIQEFGLGSYLGDFVPLFRLFDFSGYKNKLKRVGEKMDALFQGLVDDHRKNKKENKNTMIDHLLSLQESQPEYYSDQIIKGLIMSLIVAGTETSAITLEWAMANLLNHPDVLEKARIELDNHIGQECLIEEEKATKLQYLQNIISETLRLHPAAPMLIPHVSSDGCTVGGYDVPQNTILMVNAWDIHRDPNLWADPTSFKPQRFENSQQADMHGFIPFGMGRRSCPGSGLSLRTLSLTLGSLIQCFEWKRVNNEEVNMTEGRGTVIPMAIPLEAQCKVRPIINNIFS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5728 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Tpr2g5728 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 497 - -
Tpr2g5728 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 497 - -
Tpr2g5728 501 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 Pfam Cytochrome P450 33 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g5728 501 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5728 Tpr-Chr2 66495423 66497735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5728 9 501 Cytochrome P450 AT4G37340 52.305 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5728 K13260 - gmx:100804509 688.723