Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5707 ATGATTAATCTCGCGGGTTACAGCACCACTAATCAGAGACCAATTTCTCTGATATCAATTATGCCAAACACCACCGTTCCGTCGCGCTACGTCGTCGTTTTCACGTTTCGAAGTTCCCAAAAACATAGCTTCAGCACCTCTTCTGAATCAGTTTGGACAGATTATCCTATAGAGAACGCGTACGAGCTTCTAGAAGTATCGGAAACAAGCTCATTCGATGAGATCAAAGCGTCGTTTCGTAAATTGGCGAAAGAAACTCACCCTGACCTCGCTGAGTCAAGGAACGATTCCACTGCTTCACGACGATTTGTTCAAATCCTTGCCGCATATGAGATTCTTTCAGATTCTCGGAAGAGAGCCCATTATGACATGTACTTGTTATATCAGAAAAAGCTTATGCAGAAGCATTCTGAACAGGGTTCAAAATTGCGCATTTATGAATCACAAACTACGACATTCAATGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGATATTTTGTCAGAGAAGAAAGTGGTGGTTGGAACAGGATATTTTGATGTACTCGAAAGAGATTTTTATTCTGCTATTCATGCAGCATACTATGGACCCGAAATTGATTCTATCCCCATGGAGTTTCTTCCCGAATGCTTTGAGGCTGAGGAGAGGTCCTCTTGTGAAACTCCTGAGGTTTTGCATTTGGTTTCTGGCCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGATTCCAGAGATATCATCTACTGAAAATGAAAAGTTAACTTCTTATATACCCTTCCATTCAGGCCTTTGTCAATCTATAACGGACGTGGATACCTGCAGGAATGTAGAAAGTCCAGATAATTTTGTAACACAACAAAGCCGCAGCTCTAAAATTTCAAATAATGTTTCAGATGCGTATAGAGATCTAGAATTGCATGTCTCTGGAAAATTAGTTGCTACAGCATCTAGGGTCCTACCTAGATGTCGTTCTGATGCGATGCAAAAGGAAGGTGCTGAAGATCACATTCATGTGTTCCTTAATTCAGATGAAGATCCCAGACATATCAGCAGCGATTTTTCAAGAAATTTATATGCAAATAATACTGTTGGAAGAAAAATGCATTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGACGAAGGATGTTGTTATGTCTACAACAGCAGCTGTGAAAAAACCCATGTGATTATGAAACACAGAACGTTGTTGGTGAAGCATATGCACTGGTATCATGTGGGTGAGAAAGTTTCAGTTTGTGAGTGTAGATGCACCAGAGCACGTTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGCTGTGGCTTCCACGACATAGGGGGTTGGTATGTGGAAACATATGGCAAAGATAAGAAGGGTCGTACTATGCCATCACAAAGGTTCTGGGATGGCTTGGATTATAGCCAGCAAACCGAAATAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGAACACTTGATCTTGAATATACCAAAACAAGCAAGAAAACATTTACGGATGCCGTTGGAGCACATATGTTTCAAATTCTTCACTGGTGCAAGAAACTTGCTAAATAG 1608 0.4086 MINLAGYSTTNQRPISLISIMPNTTVPSRYVVVFTFRSSQKHSFSTSSESVWTDYPIENAYELLEVSETSSFDEIKASFRKLAKETHPDLAESRNDSTASRRFVQILAAYEILSDSRKRAHYDMYLLYQKKLMQKHSEQGSKLRIYESQTTTFNEMEVVEWLKWYRLAINDILSEKKVVVGTGYFDVLERDFYSAIHAAYYGPEIDSIPMEFLPECFEAEERSSCETPEVLHLVSGRDLFGMVCLVNKIPEISSTENEKLTSYIPFHSGLCQSITDVDTCRNVESPDNFVTQQSRSSKISNNVSDAYRDLELHVSGKLVATASRVLPRCRSDAMQKEGAEDHIHVFLNSDEDPRHISSDFSRNLYANNTVGRKMHLGTISGLGSSPDEGCCYVYNSSCEKTHVIMKHRTLLVKHMHWYHVGEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKKGRTMPSQRFWDGLDYSQQTEIRLHPAMYLFALAYRTLDLEYTKTSKKTFTDAVGAHMFQILHWCKKLAK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5707 535 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Tpr2g5707 535 SMART dnaj_3 58 118 IPR001623 -
Tpr2g5707 535 Pfam DnaJ domain 59 123 IPR001623 -
Tpr2g5707 535 CDD DnaJ 59 115 IPR001623 -
Tpr2g5707 535 PRINTS DnaJ domain signature 61 79 IPR001623 -
Tpr2g5707 535 PRINTS DnaJ domain signature 79 94 IPR001623 -
Tpr2g5707 535 PRINTS DnaJ domain signature 98 118 IPR001623 -
Tpr2g5707 535 SUPERFAMILY Chaperone J-domain 56 129 IPR036869 -
Tpr2g5707 535 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Tpr2g5707 535 Gene3D DnaJ domain 52 147 IPR036869 -
Tpr2g5707 535 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 28 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5707 Tpr-Chr2 66212092 66220116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5707 61 125 C2H2 Transcription Factor Family AT1G74250 42.647 8.26e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5707 - - mtr:MTR_5g016110 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5707 2 66212092 66220116 Tpr2g5707 2 66212092 66220116 ECH