Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5699 ATGAGTTGCAACGGTTGCCGTGTCCTTAGAAAGGGTTGTAGTGAGTCATGTATCTTACGCCCTTGTATTCAATGGATTGATACCCCTGAAGCCCAAGGTCATGCCACTGTCTTTGTAGCCAAATTTTTCGGCCGTGCAGACCTTATGTCTTTCATTTCCAACGTTCCTCAACCACAAAGACCCGCTCTGTTTCAATCTCTGTTGTTTGAAGCGTGTGGACGAACCGTTAACCCCGTTAACGGTGCCGTTGGACTTTTATGGACAGGAAATTGGCACGTGTGCCAAGCGGCGGTTGAAACGGTGCTCCGCGGCGGAACACTTAAACCAATACCGGAGCTTCTCGGTTCAGATGCAGTTGCTTCCACTGTTGACGATTCATCCGAAGGGGAAGTCACGTGTAACGACGCGCGAAGGAGCCGAGATGTGAAATCGAGTTTCCCGTTCATGAGTTCCGGTGGTAAACGTAAACGATCGGGTGAAGTTGCGAAGGTTCAGGCAACGACTGATCTTAATCTCCGGTTGATGCCTCAGAACGCGTTGACCAACGGTTGCCGGAAGGAAATTCGCCGGTCAGGAACACCGTCGATGAATTCTGAGGAATCTGTGACGACGATGACGTGTTTGGAAAGTGGGATCGGAGATCACTACGTTCATGACGGTGACCGCAAAGTTCTCAACCTTTTTGTTTGA 690 0.5 MSCNGCRVLRKGCSESCILRPCIQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPQPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLKPIPELLGSDAVASTVDDSSEGEVTCNDARRSRDVKSSFPFMSSGGKRKRSGEVAKVQATTDLNLRLMPQNALTNGCRKEIRRSGTPSMNSEESVTTMTCLESGIGDHYVHDGDRKVLNLFV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5699 229 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Tpr2g5699 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 229 - -
Tpr2g5699 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Tpr2g5699 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5699 Tpr-Chr2 66108245 66109712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5699 1 229 AS2 family AT3G49940 56.522 2.49e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr2g5699 LOB 9.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5699 - - gmx:100816189 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5699 2 66108245 66109712 Tpr4g3959 4 46014735 46016215 ECH
Tpr2g5699 2 66108245 66109712 Tpr2g5699 2 66108245 66109712 ECH
Tpr2g5699 2 66108245 66109712 Tpr1g0478 1 4026805 4027894 PCT
Tpr4g3959 4 46014735 46016215 Tpr2g5699 2 66108245 66109712 PCT