Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5696 ATGGCCATTAGGCCTTTCCAATCCACCTTCTCGCTCCATACTTTCTTCTCTCTTTTCCGCACTCCCAATCCATTCTCCGCCGCCACAACCACCACCACCACCAACTTTCCGCCACCCTATTCTATCTTCCGTCGCTTCACCGTATCGTCTTCAACTTCATTCCCACCACCTCCTCGCCGCCCTCAACCTCCTCCTCCTCCGCCACCGTCTGACACTCTGGCGCACAAGATCGGAAAAGCCATTCGCCTCCCCGGCGCCGCCTCTAAGGCCAGAGTTTATGCTGATATCAACGTTGTTCGCCCTAAGGAATATTGGGACTATGAATCCCTCGCCGTTCAGTGGGGGGAACAAGATGATTATCAAGTTGTGAAGAAGGTTGGAAGAGGGAAATACAGTGAAGTGTTCGAGGGTGTTCACTGTACGGATAATGAAAAATGCGTAATCAAGATCCTCAAACCTGTCAAGAAGAAGAAGATAAAGAGGGAGATCAAGATATTGCAAAATCTATGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTTAGAGACCCCCAATCAAAGACCCCAAGCCTTGTATTTGAACATGTTAATAACATCGATTTTAAAGTGCTCTATCCTCACCTGTCAGATTATGATGTTCGATATTATATCTATGAACTTCTAAAGGCATTAGATTATTGCCACTCACAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATCGACCACGGGCAGCGTAAGCTTCGCCTTATTGACTGGGGACTTGCAGAGTTTTATCATCCTGGGAAAGAGTATAATGTCCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTACTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGTCTCTCGGTTGTATGTTTGCTGGAATTATATTCTGGAAGGAGCCGTTTTTTTATGGACAAGATAACTATGATCAACTAGTGAAAATAGCCAAGGTACTTGGAACGGATGAGTTATATGCGTATCTAAACAAGTATCGCATAGAGTTGGACCCGCAGCTCGCAATGCTTGTTGGAAGGCATGGTCGGAAGCCGTGGACAAAGTTTATTGGTGTGGATACCAAACACTTGGCTGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTACGGTATGATCACGAAGAACGGCCCACTGCAAAAGAAGCTATGGCCCACCCCTACTTCAATCCAGTGAGAAATGCAGAAAGTAGTAAAACGCGTACACATTGA 1260 0.4516 MAIRPFQSTFSLHTFFSLFRTPNPFSAATTTTTTNFPPPYSIFRRFTVSSSTSFPPPPRRPQPPPPPPPSDTLAHKIGKAIRLPGAASKARVYADINVVRPKEYWDYESLAVQWGEQDDYQVVKKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDPQSKTPSLVFEHVNNIDFKVLYPHLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHGQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGIIFWKEPFFYGQDNYDQLVKIAKVLGTDELYAYLNKYRIELDPQLAMLVGRHGRKPWTKFIGVDTKHLAVPEAIDFVDKLLRYDHEERPTAKEAMAHPYFNPVRNAESSKTRTH* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5696 419 MobiDBLite consensus disorder prediction 54 71 - -
Tpr2g5696 419 SUPERFAMILY Protein kinase-like (PK-like) 94 409 IPR011009 -
Tpr2g5696 419 Gene3D Transferase(Phosphotransferase) domain 1 194 418 - -
Tpr2g5696 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Tpr2g5696 419 PANTHER CASEIN KINASE II SUBUNIT ALPHA 70 411 IPR045216 GO:0004674|GO:0006468
Tpr2g5696 419 MobiDBLite consensus disorder prediction 52 71 - -
Tpr2g5696 419 CDD STKc_CK2_alpha 101 405 IPR045216 GO:0004674|GO:0006468
Tpr2g5696 419 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Tpr2g5696 419 SMART serkin_6 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5696 419 Gene3D Phosphorylase Kinase; domain 1 106 193 - -
Tpr2g5696 419 PANTHER BNAA04G13490D PROTEIN 70 411 - -
Tpr2g5696 419 ProSiteProfiles Protein kinase domain profile. 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5696 419 Pfam Protein kinase domain 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5696 Tpr-Chr2 66061481 66067753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5696 118 406 Core Cell Cycle Gene Families AT1G76540 29.841 2.38e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Tpr2g5696 Pkinase 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5696 K03097 - csv:101205903 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5696 2 66061481 66067753 Tpr2g5696 2 66061481 66067753 ECH