Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5690 ATGGCTAACTTGGATGGCAATTCACTCCAGAATGCTGAGAAATCCATCCCGATTCCACCTCCTTCGCCTCAATCAGCAGCAACCGGTTATCCTTGCGAGTATGTGGTGATGAATAATTTAGCACAAAGAGGGCGAAACAGCTGTGTCTCTTCAGCAACAAGAGATTTATGGGAGCGTCTTTTCAATGATGGTTATAAAGCCGACGTTTGCATTAATACTGATAATGGTGGCATTATTTACGCTCATTCTAACATTATTGGAGCGGCTTCTCCTACATTGAGAGGCATGCTGAAGCAAGCAAATCGTTTCAATCGGTGGAGAACAATCTCAATCTCTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATACTTGTACTCTTCCTGTTACGAGCAAGAAGAAATGAAGGAATTTGTCCTACATTTGTTGGTGCTGTCACATGTATATGTGGTCCCTCACTTGAAGCGTGAATGCGAACAGAAGCTAGAAATGGGGTTACTCACCCTAGATAATGTAGTTGATGTATTTCAACTTGCATTATTGTGTGATGCTCCGCGGCTCAGTCTCATTTGTCACCGTATGATAATAAAAAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAGGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAATCAATGATTGAAGAAGAAAATAGCAAGAAGGAGAGGATCAGAAAAATGAATGAAAGACAGGTCTATCTGCAACTATATGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCGCATGATAAAGACTTTACAGAAAACCAACCGTGTAGGTATTCATCCTGCAAAGGGCTAGAATTGCTTGTTCGACATTTTGCTGGTTGCAAGTTGAGAGTCCCTGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTGTTGGAGCTGCATTCTCGTCTGTGTGCTGATCCAAATGCCTGTGGAGTTCCTTTGTGCAGGAACTTTAAGCAGAAAATAGCAAAACAAAGCAAAAAAGATGAAATTAGATGGAAAATATTGGTTGAAAAGATCTTGACAACAAGAGGAATTGGGATTGCATCGTGCTTTCGGACACTATGA 1128 0.4193 MANLDGNSLQNAEKSIPIPPPSPQSAATGYPCEYVVMNNLAQRGRNSCVSSATRDLWERLFNDGYKADVCINTDNGGIIYAHSNIIGAASPTLRGMLKQANRFNRWRTISISGVPHDAVRVFIRYLYSSCYEQEEMKEFVLHLLVLSHVYVVPHLKRECEQKLEMGLLTLDNVVDVFQLALLCDAPRLSLICHRMIIKNFKTVSESEGWKAMKQSHPVLEKEVLESMIEEENSKKERIRKMNERQVYLQLYDAMEALVHICRDGCRTIGPHDKDFTENQPCRYSSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPNACGVPLCRNFKQKIAKQSKKDEIRWKILVEKILTTRGIGIASCFRTL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5690 375 SUPERFAMILY POZ domain 47 163 IPR011333 -
Tpr2g5690 375 Pfam TAZ zinc finger 252 335 IPR000197 -
Tpr2g5690 375 SUPERFAMILY TAZ domain 244 343 IPR035898 -
Tpr2g5690 375 SMART BTB_4 67 167 IPR000210 GO:0005515
Tpr2g5690 375 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g5690 375 ProSiteProfiles Zinc finger TAZ-type profile. 241 338 IPR000197 -
Tpr2g5690 375 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g5690 375 Pfam BTB/POZ domain 60 164 IPR000210 GO:0005515
Tpr2g5690 375 Gene3D Potassium Channel Kv1.1; Chain A 39 168 IPR011333 -
Tpr2g5690 375 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
Tpr2g5690 375 Coils Coil 221 244 - -
Tpr2g5690 375 Gene3D TAZ domain 242 363 IPR035898 -
Tpr2g5690 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 9 373 IPR044513 -
Tpr2g5690 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 9 373 - -
Tpr2g5690 375 Gene3D - 169 241 - -
Tpr2g5690 375 SMART TAZ_2 244 336 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5690 Tpr-Chr2 65948548 65953548 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tpr2g5690 BTB 9.3e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5690 - - lja:Lj2g3v1968190.1 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5690 2 65948548 65953548 Tpr2g5690 2 65948548 65953548 ECH