Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5689 ATGGGTAGTTTTGTTGACACCCCTTTTTCTTTGTCTAGTCTACTCTGTCATGAACAAGATGAATCCATCTTCATCTTCCAACAAGATGAAAATGACAATAACCCATGTTTTCTTTTAGACGATGAAGAAGAATACATTCATTATTTGTTCAAACAAGAAACAGGATTTGGATCCTTATCTTATGATGATGTTGATGATGATGTTGATTCAAGTAAAAGCTTATTCTGGTTCAGAAATGCTCGCTTAAATGCTATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCACTTACCAAACAGCTTATTTATCAATCACTTATTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCTAAACCTTGGGCTATACAATTACTATCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGGGTTCCTCCATTATCAGAATATCCAATAGAGTATAGATTTGAGAACAAAGTTATCAAAAATATGGAACTTTTGATTTTGAGTACTTTGGAATGGAAAATGGGATTACCAACCCCTTTTGCTTATTTGCATTATTTCTTCACCAAGTTCTGCAATGAATCAAGATTAGAAACAATAATCTCAAAAGCCACACAACACATTGTCACATTGGTCAAAGAGTTTAATTTGATGAATCAAAGACCATCTATAATTGCTTCTGCTTCTATATTAGCAGCTTATGATTCCACATTAACCAAAAAAGAAATGGATCTTCGGTTAAGTGTAATCTCATCATGGGGAAATCTAGAGAGTGGACAGGTATTTTCTTGTTACAATGTTATACAAGAAAAGAGGATAAACAAAGTTAAGAAGACACCTTCATCGGATTTATTATTATCAACAGAGACAAATTCCACATGTGATGTTGTTGAGAACAAATCTAATGGTTGTTTAGGAGTTAAGAGAAAGCTTGGTTATGAAAACAATGAAGAATGTCAAGAACAAAAGCTACAAAGACTTTAG 990 0.3273 MGSFVDTPFSLSSLLCHEQDESIFIFQQDENDNNPCFLLDDEEEYIHYLFKQETGFGSLSYDDVDDDVDSSKSLFWFRNARLNAIDWIFNTQAKFGFTYQTAYLSITYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQRVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNESRLETIISKATQHIVTLVKEFNLMNQRPSIIASASILAAYDSTLTKKEMDLRLSVISSWGNLESGQVFSCYNVIQEKRINKVKKTPSSDLLLSTETNSTCDVVENKSNGCLGVKRKLGYENNEECQEQKLQRL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5689 329 SUPERFAMILY Cyclin-like 33 177 IPR036915 -
Tpr2g5689 329 CDD CYCLIN 81 170 IPR013763 -
Tpr2g5689 329 SMART cyclin_7 86 171 IPR013763 -
Tpr2g5689 329 Gene3D - 179 253 - -
Tpr2g5689 329 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Tpr2g5689 329 Gene3D - 79 178 - -
Tpr2g5689 329 PANTHER CYCLIN-D5-1 37 286 - -
Tpr2g5689 329 PANTHER CYCLINS 37 286 IPR039361 -
Tpr2g5689 329 Pfam Cyclin, C-terminal domain 180 277 IPR004367 -
Tpr2g5689 329 Pfam Cyclin, N-terminal domain 69 177 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5689 Tpr-Chr2 65932444 65934805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5689 10 260 Core Cell Cycle Gene Families AT4G37630 36.803 9.14e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5689 K18811 - gmx:100798140 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5689 2 65932444 65934805 Tpr2g5689 2 65932444 65934805 ECH
Tpr2g5689 2 65932444 65934805 Tpr4g3953 4 45895864 45896982 ECH