Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5679 ATGGGGAAAAAGCAGCATAGCAAAGACCGAATGTTCATAACCAAAACTGAATGGGCAACGGAATGGGGAGGTTTCAAATCCAAAGAAAATCGCACCGTTTTCAAACGTCTTCCTTTTTATTGCTGCGCACTTACGTTTACTCCGTTTGAGTTTCCAGTTTGTACTCCTGATGGCAGCGTTTTCGATGTTATGAACATAACTCCATATATTATAAAATATGGTAAACATCCTGTAACTGGAGCTCCCTTGAAGCAGCAAGATCTCATCCAACTAAATTTTCACAAGAACTCAGAAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACACACATTGTGGCAGTCAAGACTACTGGAAATGTCTTCTGCTACGAGGCCGTTAAAGAGTTAAACATCAAGACAAAAAACTGGAAGGAGCTTCTCACTGATGAGGCGTTTACTAAGGATGACCTTATAACAATTCAGAATCCTAATGCACTTGACCAGAAGGTGCTTCTGGATTTTGATCATGTCAAACAAAATTTGAAAGTTGAGGATGAAGAACAACAGAAAATGAATTCAGATCCAACATATAACATAAACATGTCCGGTGATATCAAGCAAATGCTTAAGGAGCTTGGAACTGAGGAAGGAAAGGAAACTGCATTGCACGGTGGAGGTGGTGGCAAGGCACAAAAAGAAAGGGCCGCTGCACTTGCTGCAATCTTAGCTGCAAGGTCACATGTTAAAGAAGATTCCAAATCGAATGCCGATGGAGCTCCCCAGGCACTCAGTATTGTAGATGCTGCCTCTGCCGCATTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCACATCAAGTGATAAAACTGCTGCCCGGATAGCTATGCATGTGGCTGGTGACAGGGCACCAGTGAATGCAAAGATGGTTAAAAGTCGTTACACTACTGGTGCTGCTTCCCGGTCTTTCACTTCAACATCATATGACCCAGTTACAAAAAATGATTATGAATATGTGAAAGTTGAGAAGAATCCAAAGAAAAAGGGATATGTACAACTGCATACAACACATGGTGATTTGAACATTGAGCTGCATTGTGATATAGCGCCCAGGGCATGTGAGAACTTTATCACGCTTTGTGAACGTGGATATTATAACGGAGTAGCTTTTCATAGAAGCATTAGGAATTTTATGATACAAGGTGGCGATCCTACTGGTACTGGTAAAGGTGGTGAATCGATCTGGGGAAAACCTTTTAAGGATGAACTCAACTCCAAATTAGTCCACTCTCGGAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACATACTAATGGTTCCCAGTTTTTCATCTTGTACAAATCTGCAAATCATTTAAACTTCAAACATACAGTTTTTGGAATAGTAGTTGGTGGCTTGCCTACACTAACAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTGGAGGAAATCAAGATAACAGGTGTTACAACGTTTGTCAATCCTTACACCGAACCAGATGAGGAAGAAGAGCAAGCTAATGCCAAAGAGAAGAATGCAAATGATGAAGAAAATGACAAGGTTGGCTCATGGTATAGTAATCCTGGAGCTGGAACTTCTGAATCTGGAGGTACTGGTGGTGGCGTTGGCAAATACTTGAAAGCTAAGAATGTTTCGGCTGAACCTGCTGCTGTCGACACCGCTACAGCAGTTGTAGGAAAGAAAAGAAAAGCAGTTGTCAGTGGTGAATTTAAAGATTTTTCTGCTTGGTAA 1773 0.4185 MGKKQHSKDRMFITKTEWATEWGGFKSKENRTVFKRLPFYCCALTFTPFEFPVCTPDGSVFDVMNITPYIIKYGKHPVTGAPLKQQDLIQLNFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEAFTKDDLITIQNPNALDQKVLLDFDHVKQNLKVEDEEQQKMNSDPTYNINMSGDIKQMLKELGTEEGKETALHGGGGGKAQKERAAALAAILAARSHVKEDSKSNADGAPQALSIVDAASAALHGRSAAAAKATSSDKTAARIAMHVAGDRAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDELNSKLVHSRRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGIVVGGLPTLTTMEKVPVDDSDRPLEEIKITGVTTFVNPYTEPDEEEEQANAKEKNANDEENDKVGSWYSNPGAGTSESGGTGGGVGKYLKAKNVSAEPAAVDTATAVVGKKRKAVVSGEFKDFSAW* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5679 590 Gene3D - 327 512 IPR029000 -
Tpr2g5679 590 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Tpr2g5679 590 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Tpr2g5679 590 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 347 497 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 382 399 IPR020892 GO:0003755|GO:0006457
Tpr2g5679 590 SUPERFAMILY Cyclophilin-like 347 507 IPR029000 -
Tpr2g5679 590 MobiDBLite consensus disorder prediction 509 525 - -
Tpr2g5679 590 MobiDBLite consensus disorder prediction 503 528 - -
Tpr2g5679 590 CDD cyclophilin_RING 347 505 - -
Tpr2g5679 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Tpr2g5679 590 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 588 IPR044666 -
Tpr2g5679 590 Pfam U-box domain 39 90 IPR003613 GO:0004842|GO:0016567
Tpr2g5679 590 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Tpr2g5679 590 SUPERFAMILY RING/U-box 37 104 - -
Tpr2g5679 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 361 376 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 387 399 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 430 445 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 445 457 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 458 473 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 351 498 IPR002130 GO:0000413|GO:0003755
Tpr2g5679 590 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5679 Tpr-Chr2 65843376 65850193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5679 1 590 U-box Gene Family AT5G67530 75.879 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5679 K10598 - gmx:100819923 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5679 2 65843376 65850193 Tpr2g5679 2 65843376 65850193 ECH