Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5677 ATGGATACATTGTTTAGACTTGTCAGTTTTCAACACCAACACCAACCTGATCATCATCATCATCAATCTCTCAACTCCACAACTAGCATAACAACAACTTCTAGTAGCTCTAAATCTTCTAAACAAAACTATCACCAAAATCACTACTACGAACAACATCATCAAGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGATCTTTCCTCATCTTCTTCTAAGCACTACTATCCTTATAGTCAACCCTTCACCACAATTACTACTCACACCCCCACCCCTACACCTACACCAACGCCGCCACCACCAACCGATTTCGCCTTCGAATTAACCGGTAAGTGGGCCCATAACATCCTCCTTGAAACAGCACATGCTATAGCTGAAAAAAACACAACTCGCTTACAACAACTTATGTGGATGCTTAATGAACTGAGTTCTGCTTACGGAGACACAGAACAAAAACTCGCGGCTTATTTTCTTCAAGCCTTGTTTTCTCGAATGACCGAAGCTGGTACTCGAACCTTTCGAACCCTAGCTTCGGCATCAGAGAAAACTTGCTCATTTGAATCAACAAGAAAAACGGTTTTGAAATTTCAAGAAGTTAGTCCTTGGACTACTTTCGGCCATGTTGCGTGCAATGGCGCAATTTTAGAAGCCTTAGAAGGAGATTCTAGATTGCATATAATTGATATAAGTAACACGTATTGCACTCAATGGCCTACGCTTTTCGAAGCGTTGGCTACTCGCACTGACGATACTCCTCATCTTCGGTTAACCACCGTTGTAACCGCTAGTGGCTCGGTTCAAAAAGTTATGAAAGAAATTGGTTCAAGATTGGAGAAATTTGCTAGACTTATGGGAGTTCCATTTAAATTCAATGTTATTCATCACGCCGGTGATCTTTCCGATTTGGATTTCTCCGATTTAGATATTAAAGAAGATGAAGCTTTAGCTGTTAATTGTGTTAATGCTTTGCATTCAATTACTATTGGTAATAGTAATGGTAATCGGCGCGACGTATTAATAACTAAATTAATCGCGTTGCGGCCGAGGATAGTGACGGTGGTGGAGGAAGAAGCTGATTTAGATTTTGGTTATGAAGGATATGAATTTGTGAGAGGTTTTGAAGAATGTTTAAGATGGTTTAGGGTTTATTTTGAAGCATTAGAAGAGAGTTTTACGAAGACGAGTAACGAGCGGTTAATGTTGGAAAGGGAAGCCGGAAGAGGGATAGTTGATTTGGTGGCGTGTGCTCCGGTGGAGTCGATGGAACGGAGAGAAACCGCGGCGAAATGGTGTCAACGTTTGCATGGTGGAGGGTTTAATACGGTGGCGTTTAGTGAAGAAGTTTGTGATGATGTTAGGGCTTTGTTGAGAAGGTATAAAGAAGGGTGGTCGATGGCGCGGTGTAATGACGCCGGAATATTCTTGTCGTGGAAGGAACAACCGGTGGTTTGGGCTAGTGCATGGAGGCCTTGA 1479 0.4192 MDTLFRLVSFQHQHQPDHHHHQSLNSTTSITTTSSSSKSSKQNYHQNHYYEQHHQEEECFNFFMDEEDLSSSSSKHYYPYSQPFTTITTHTPTPTPTPTPPPPTDFAFELTGKWAHNILLETAHAIAEKNTTRLQQLMWMLNELSSAYGDTEQKLAAYFLQALFSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGDSRLHIIDISNTYCTQWPTLFEALATRTDDTPHLRLTTVVTASGSVQKVMKEIGSRLEKFARLMGVPFKFNVIHHAGDLSDLDFSDLDIKEDEALAVNCVNALHSITIGNSNGNRRDVLITKLIALRPRIVTVVEEEADLDFGYEGYEFVRGFEECLRWFRVYFEALEESFTKTSNERLMLEREAGRGIVDLVACAPVESMERRETAAKWCQRLHGGGFNTVAFSEEVCDDVRALLRRYKEGWSMARCNDAGIFLSWKEQPVVWASAWRP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5677 492 ProSiteProfiles GRAS family profile. 106 491 IPR005202 -
Tpr2g5677 492 PANTHER PROTEIN SHORT-ROOT 1 491 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Tpr2g5677 492 MobiDBLite consensus disorder prediction 22 45 - -
Tpr2g5677 492 Pfam GRAS domain family 117 491 IPR005202 -
Tpr2g5677 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 491 IPR005202 -
Tpr2g5677 492 MobiDBLite consensus disorder prediction 12 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5677 Tpr-Chr2 65827544 65840292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5677 1 492 GRAS Transcription Factor Family AT4G37650 59.294 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g5677 GRAS 1.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5677 - - gmx:100820459 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5677 2 65827544 65840292 Tpr2g5677 2 65827544 65840292 ECH
Tpr2g5677 2 65827544 65840292 Tpr4g3949 4 45844612 45846713 PCT