Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5658 ATGAAGTCCTTTGAAAATATTTATGATACCATTAACCTAAAAAATCAAAATAGTAACATGTTGGGTTTCTCTGTCTCTCCTCAAATGAATATAAGTGTTCCATCCTTTGCTGCTGCTGCTACTGAAACAGTTCCAACAAGCTTTTATTATCACCCTACACCTCTTCATAACTATGGCTTTTACTATGGACTTGAAGGTGAACATGTTGGATTGTATTCACCTTTGCCTATTAATATGCTTGATGGATCAACATATGGTATAGAAGCTCTTAGTAGATCACAATCACAAGCAATGGGATTTCCTCAATATGAATGTAATACCAAAGAAGCACTGCAACTAAACATGGATAGTATTTTCTACAACCAAACTTCATGGCATAATAAACCAAACAATCCAAATAATGTAAGTTATGTACAAGAGAGTACGAGTCTGTTGGAGAGTCTGAGGGAGCATCAGGAGCAACAAGTCTCGTATTACACCGTCTTAGGAAATCGTAATGTGATATTAGAAGGGTCGATGAAAAATCAGCTAAAAGATAGTTTCCAGCTCCCAAATATAGTTGAAGATGAAGTTTCTGGTCTTAAGAGATGGGTCTCAAGGGACATTCATGCTACTAATCATGCACAAGAGTCAAAATATGGGTTGACCATGAGTCCTACCTCACAATCTAGTTGTGTTACAAGTTCACAACAAACATCACTTACTGATTCTGTTTCCATTGATACAATGAAAAGGAAAAAGAATCAGAATCAAACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGACATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGATAACAGCTGTAAGAAAGAAGGACAAGCTAGGAAAGGAAAGCAAGTTTATCTAGGAGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATATGGCTGCACTCAAGTATTGGGGACCCTCCACTCGTATAAATTTTCCATTAGAAAATTATCAAAAGGAGCTTGAGGAAATGAAGAAAATGACTAGACAAGAATATGTTGCTCATTTAAGAAGGAAAAGCAGTGGATTCTCAAGAGGAGCTTCCATGTATAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAAGCTCGAATAGGGAGAGTTGCTGGAAATAAAGATCTCTATCTTGGAACATTCACTACACAAGAAGAAGCAGGTGAAGCCTATGACATAGCTGCTATAAAATTCAGAGGAGCAAATGCTGTTACAAATTTTGACATAACAAAATATGATGTGGAAAAAATTATAGCAAGCAATAATCTTCTTAACAGTGAAGAAGCTAAGAGAAACAGAAAAATGGATGATTTAATTAACATTGAAGAAGCCATTAATCCAATGCAGAAGAGGTGCAAAATTCAATCATTCTCAATAGGTTTAGAAGAAATATATAATCAAGAAGTAGAGGAATATTCAAATAGAGTGTTACATGTATCAAATCCTTCTTCAATTGTGACAAGTTTGTGCAGCTCAAGAGAACAAAGTCCTGAAAACAGAACAAGCTTACCAATGCTGTTTGGAATGACTTCAACAGAATCAATGTCTTCATTTTCTTTGCCTCAAATGCCACTGTCTTTTTTTGCTGCTTGGAATGATGCAGCATAG 1641 0.3626 MKSFENIYDTINLKNQNSNMLGFSVSPQMNISVPSFAAAATETVPTSFYYHPTPLHNYGFYYGLEGEHVGLYSPLPINMLDGSTYGIEALSRSQSQAMGFPQYECNTKEALQLNMDSIFYNQTSWHNKPNNPNNVSYVQESTSLLESLREHQEQQVSYYTVLGNRNVILEGSMKNQLKDSFQLPNIVEDEVSGLKRWVSRDIHATNHAQESKYGLTMSPTSQSSCVTSSQQTSLTDSVSIDTMKRKKNQNQTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQARKGKQVYLGGYDMEEKAARAYDMAALKYWGPSTRINFPLENYQKELEEMKKMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFTTQEEAGEAYDIAAIKFRGANAVTNFDITKYDVEKIIASNNLLNSEEAKRNRKMDDLINIEEAINPMQKRCKIQSFSIGLEEIYNQEVEEYSNRVLHVSNPSSIVTSLCSSREQSPENRTSLPMLFGMTSTESMSSFSLPQMPLSFFAAWNDAA* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5658 546 Gene3D AP2/ERF domain 361 421 IPR036955 GO:0003700|GO:0006355
Tpr2g5658 546 Gene3D AP2/ERF domain 258 327 IPR036955 GO:0003700|GO:0006355
Tpr2g5658 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 209 - -
Tpr2g5658 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 214 459 - -
Tpr2g5658 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 214 459 - -
Tpr2g5658 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 209 - -
Tpr2g5658 546 CDD AP2 360 421 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 ProSiteProfiles AP2/ERF domain profile. 361 419 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 CDD AP2 258 325 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 Pfam AP2 domain 362 411 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 Pfam AP2 domain 259 317 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 ProSiteProfiles AP2/ERF domain profile. 259 325 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 SMART rav1_2 361 425 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 SMART rav1_2 259 331 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 PRINTS Ethylene responsive element binding protein signature 401 421 IPR001471 GO:0003700|GO:0006355
Tpr2g5658 546 SUPERFAMILY DNA-binding domain 258 327 IPR016177 GO:0003677
Tpr2g5658 546 SUPERFAMILY DNA-binding domain 360 420 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5658 Tpr-Chr2 65586728 65590690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5658 57 545 AP2-EREBP Transcription Factor Family AT4G37750 45.000 1.13e-130 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Tpr2g5658 AP2 3.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5658 K09285 - gmx:100812275 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5658 2 65586728 65590690 Tpr4g3930 4 45634777 45638449 PCT