Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g5649 | ATGACTCAAATTCAAACTACTATTAACACCTTCAAAACTTCATCATTCTCATCATTTCTCACTCTACCAAAATTCTACAACATGGAAAAAATACTCATTCTTATTCTTCTCTTTTCATTACTATGTTCAAGTGGAAGCACTTTTTCACTTTCAAGAGACTATGAAATTCTGCTTCATGTCAAGAACACTCAAATTGATGACCAAAACAAGAGTCTCAACAATTGGCTTCCAAACACAGAACACAATCCTTGTAACTGGACCGGTATAACCTGTGATTCACGAAACAAATCAGTTATATCCATCGACCTCTCAGAAATCGGCATTTATGGCGATTTTCCCTTTAATTTCTGTCGAATTCCAACTCTCCAAAACCTATCACTTGCTGTCAATTATCTTGGCAATGAAATTTCCTCACATTCCATGCTACCATGTTCACACCTTCGTGTCTTGAACATCTCCGATAACTTATTTGTCGGAACCTTACCGGAATTCAACGCAGAAATCTTTCAATTAAGAGTACTCGACGCCTCAACCAACAACTTCTCCGGTGATATTCCGGCTAGTTTTGGCCGGTTTCCACACCTGAAAGTACTCATTTTGTCTAACAACCTTTTCACCGGTGACATTCCGGCAAGTTTTGGCCTATTTCCGCAACTGAATGTACTAAGTTTGTCCGGTAACTTTTTCACCGGAACAATTCCTTCATTTTTAGGTAATCTCAGTGAATTAACTCAATTTGAACTTGCTTATACAGAAACAATGAAACCAGGTCCTTTACCTTCTCAACTAGGAAATCTTACAAAGCTAGAAATTCTCTACCTTGCCAATATCAACCTCATAGGTAACATACCAGATTCTATTGGAAACCTTATTTCCATAAAAAACTTTGATTTGTCTCAAAATTCCTTGTCTGGTAAAATCCCAGAAACCATTTCTGGTATGAAAAATGTTGAAAAAATTGTACTATTTGATAACAATCTTTCTGGTGAAATTCCACAAGGTTTAACAAATCTTACAAATTTGTTTCTATTAGACCTCTCTCAGAACACTCTCACCGGAAAATTGTCGAAAGAACTCGTTTCAATGAATCTTTCTGTTATTCACTTGAATGACAATTTTCTCAGTGGAGAAGTTCCAGAAAGTTTAGCTTTGAATCCAAATTTGCAGGATTTGTGTCTTTTCAACAATAGCTTTTCAGGGAAACTACCACAAGATCTTGGAAAATACTCTGCCATTGAAGAAATCGATGTTTCAACAAATAACTTCATTGGAGAGTTACCAAAGTTTCTCTGTCAAAAGAAGAAGCTTCAAAGACTTCTCACATTCAAAAACCGATTTTCCGGTTCTCTTCCTGATGAGTATGGTGATTGTGATTCTCTTCATTATGTAAGAATTGAGAACAATGAACTTTCTGGTTCAGTTCCAGCAAGATTCTGGAACCTGCCCAATTTTTCTCTTCTGAAAATGGATCATAACAGGTTTGAAGGTTCAGTCTCAGGTTCAATCAGAGCAAAGGGATTAATCAAACTAGTTTTAGCCGGTAATAGGTTTTCCGGTGAGTTTCCGGTAGGTGTCTGCAAACTTGTTGAGCTTGTGCAAATTGACATTGGAAACAACAGGTTTACCGGTGAAGTTCCTACCTGCATAACCGGTTTGAAAAAGTTGCAGAAACTGAATATGCAGGGGAACATGTTCACCGGTAAAATTCCTGGTAATGTATCTTCATGGACTGAATTAACCGAGTTAAACTTGTCGAATAACCGGTTCACTGGTTCAATTCCACCGGAACTTGGTAATTTGCCTGGTTTAATATACCTTGATCTCTCCGTTAATTCTTTAACGGGGAAGATTCCGGTGGAGTTAACAAGCTTAAGGTTGAATCAGTTCAATGTTTCTGATAACAAATTGTCTGGTGAGGTTCCTTCGGATTTTAACCGCGAAGTTTACTTATCGGGACTAATGGGTAACCCGGGTTTGTGTAGCAATGTAATGAAAAACTTTCATTCTTGTTCAAAACATAGACCCTTTTCAGTTGTTGCAATAATTGTTTTATCTGCTTCTGTTGTGTTGATTTTTGTATCTGGTTTATGGTTCATGAAGAAAAAGTCGAAATCTTTCGTTGGAAAATCTAAACGGGCTTTTATGACAACTGCATTTCAGAGAGTTGGGTTCAATGAGGAAGATATAGTTCCTTTTTTAACCAATGAGAATTTGATTGGAAGAGGTGGGTCGGGTCAGGTTTATAAAGTGAAAGTGAAAACGGGTCAAATAGTTGCTGTGAAGAAACTTTGGGGTTGTGGAACACAGAAACCTGATATAGAATCTGTGTTCAAGTCAGAGATTGAAACATTGGGTAGAATTAGACATGCTAATATAGTGAAACTGTTGTTTTGTTGTAGTGCTGATGATTTCAGAATTTTGGTTTATGAGTACATGGAAAATGGAAGTTTAGGTGATGTTTTGCATGAGGGGAAGTTTGAGGAATTGTTGGATTGGTCTAAGAGATTTGGAATTGCTTTAGGTGCTGCTAAAGGGTTAGCTTATTTACACCATGATTGTGTTCCTCCTATTGTTCATAGGGATGTTAAGAGTAATAACATATTGCTTGATCATGATTGTGTGCCTCGTGTCGCTGATTTTGGACTTGCTAAGACGTTGCAGCGCGACGCAAGTGAAGCTGCTATGTCTAGAGTTGCTGGTTCATATGGTTACATTGCTCCAGAATATGGTTATACATTGAAAGTGACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTGTTGATGGAATTGATAACTGGGAAGAGGCCAAATGACTCATATTTTGGTGAGAACAAAGATATTGTGAAGTGGATAACTGAGATTGCTATATCAACATCTCATGAAGTAGGAGGAAGTGACAACATTAGAGGAGGCCTAAATTGTGTTGTGACAAAGATTGTGGACCCAAGATTGAACTTGGATACTTGTGATTATGAAGAGGTTGAAAAGGTTTTGAATGTGGCTCTACTTTGTACTTCAGCATTTCCAATTAATAGACCTTCAATGAGAAAAGTGGTTGAATTGCTTAAGGACCAGAAATTAGCTCGTCTCAAGTCATGA | 3102 | 0.3752 | MTQIQTTINTFKTSSFSSFLTLPKFYNMEKILILILLFSLLCSSGSTFSLSRDYEILLHVKNTQIDDQNKSLNNWLPNTEHNPCNWTGITCDSRNKSVISIDLSEIGIYGDFPFNFCRIPTLQNLSLAVNYLGNEISSHSMLPCSHLRVLNISDNLFVGTLPEFNAEIFQLRVLDASTNNFSGDIPASFGRFPHLKVLILSNNLFTGDIPASFGLFPQLNVLSLSGNFFTGTIPSFLGNLSELTQFELAYTETMKPGPLPSQLGNLTKLEILYLANINLIGNIPDSIGNLISIKNFDLSQNSLSGKIPETISGMKNVEKIVLFDNNLSGEIPQGLTNLTNLFLLDLSQNTLTGKLSKELVSMNLSVIHLNDNFLSGEVPESLALNPNLQDLCLFNNSFSGKLPQDLGKYSAIEEIDVSTNNFIGELPKFLCQKKKLQRLLTFKNRFSGSLPDEYGDCDSLHYVRIENNELSGSVPARFWNLPNFSLLKMDHNRFEGSVSGSIRAKGLIKLVLAGNRFSGEFPVGVCKLVELVQIDIGNNRFTGEVPTCITGLKKLQKLNMQGNMFTGKIPGNVSSWTELTELNLSNNRFTGSIPPELGNLPGLIYLDLSVNSLTGKIPVELTSLRLNQFNVSDNKLSGEVPSDFNREVYLSGLMGNPGLCSNVMKNFHSCSKHRPFSVVAIIVLSASVVLIFVSGLWFMKKKSKSFVGKSKRAFMTTAFQRVGFNEEDIVPFLTNENLIGRGGSGQVYKVKVKTGQIVAVKKLWGCGTQKPDIESVFKSEIETLGRIRHANIVKLLFCCSADDFRILVYEYMENGSLGDVLHEGKFEELLDWSKRFGIALGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHDCVPRVADFGLAKTLQRDASEAAMSRVAGSYGYIAPEYGYTLKVTEKSDVYSFGVVLMELITGKRPNDSYFGENKDIVKWITEIAISTSHEVGGSDNIRGGLNCVVTKIVDPRLNLDTCDYEEVEKVLNVALLCTSAFPINRPSMRKVVELLKDQKLARLKS* | 1034 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g5649 | 1033 | Pfam | Leucine rich repeat | 578 | 636 | IPR001611 | GO:0005515 | |
Tpr2g5649 | 1033 | Pfam | Leucine rich repeat | 170 | 227 | IPR001611 | GO:0005515 | |
Tpr2g5649 | 1033 | ProSiteProfiles | Leucine-rich repeat profile. | 578 | 601 | IPR001611 | GO:0005515 | |
Tpr2g5649 | 1033 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 857 | 869 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g5649 | 1033 | ProSiteProfiles | Protein kinase domain profile. | 733 | 1028 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5649 | 1033 | Gene3D | Phosphorylase Kinase; domain 1 | 723 | 811 | - | - | |
Tpr2g5649 | 1033 | SMART | serkin_6 | 733 | 1029 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5649 | 1033 | SUPERFAMILY | L domain-like | 77 | 355 | - | - | |
Tpr2g5649 | 1033 | Pfam | Leucine rich repeat N-terminal domain | 52 | 92 | IPR013210 | - | |
Tpr2g5649 | 1033 | SUPERFAMILY | Protein kinase-like (PK-like) | 733 | 1023 | IPR011009 | - | |
Tpr2g5649 | 1033 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 190 | 1028 | - | - | |
Tpr2g5649 | 1033 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 31 | 189 | - | - | |
Tpr2g5649 | 1033 | ProSitePatterns | Protein kinases ATP-binding region signature. | 739 | 762 | IPR017441 | GO:0005524 | |
Tpr2g5649 | 1033 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 | 190 | 1028 | - | - | |
Tpr2g5649 | 1033 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 | 31 | 189 | - | - | |
Tpr2g5649 | 1033 | Gene3D | Ribonuclease Inhibitor | 364 | 675 | IPR032675 | - | |
Tpr2g5649 | 1033 | Gene3D | Ribonuclease Inhibitor | 256 | 363 | IPR032675 | - | |
Tpr2g5649 | 1033 | Pfam | Protein kinase domain | 735 | 944 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5649 | 1033 | Gene3D | Ribonuclease Inhibitor | 52 | 167 | IPR032675 | - | |
Tpr2g5649 | 1033 | Gene3D | Ribonuclease Inhibitor | 168 | 255 | IPR032675 | - | |
Tpr2g5649 | 1033 | Gene3D | Transferase(Phosphotransferase) domain 1 | 812 | 1031 | - | - | |
Tpr2g5649 | 1033 | SUPERFAMILY | RNI-like | 259 | 630 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g5649 | Tpr-Chr2 | 65425405 | 65429878 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g5649 | 53 | 1027 | Receptor kinase-like Gene Family | AT5G65710 | 53.614 | 0.0 | 1023 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tpr2g5649 | Pkinase | 5.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g5649 | - | - | mtr:MTR_5g014720 | 1678.69 |