Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5626 ATGACTCAAATTCAAACTACTATTAACACCTTCAAAACTTCATCATTCTCATCATTTCTCACTCTACCAAAATTCTACAACATGGAAAAAATACTCATTCTTATTCTTCTCTTTTCATTACTATGTTCAATTGGAAGCACTTTTTCACTCTCAAGAGACTATGAAATTCTGCTTCATGTCAAGAACACTCAAATTGATGACCAAAACAAGAGTCTCAACAATTGGCTTCCAAACACAGAACACAATCCTTGTAACTGGACCGGTATAACCTGTGATTCACGAAACAAATCAGTTATATCCATCGACCTCTCAGAAATCGGCATTTATGGCGATTTTCCCTTTAATTTCTGTCGAATTCCAACTCTCCAAAACCTATCACTTGCTGTCAATTATCTTGGCAATGAAATTTCCTCACATTCCATGCTGCCATGTTCACATCTTCGTGTCTTGAACATCTCCGATAACTTATTTGTCGGAAACTTACCAGAATTCAACGCAGAAATCTTTCAACTAAGAGTACTCGACGCCTCAACCAACAACTTCTCCGGTGATATTCCGGCTAGTTTTGGCCGGTTTCCACACCTGAAAGTACTCATTTTATCTAATAACCTTTTCACCGGTGACATTCCGGCAAGTTTTGGCCTATTTCCGCAACTGAATGTACTTAGTTTGTCCGGTAACTTTTTCACCGGAACAATTCCTTCAATTTTAGGTAATCTCAGTGAATTAACTCAATTTGAACTTGCTTATACAGAAACAATGAAACCAGGTCCTTTACCTTCTCAACTAGGAAATCTTACAAAGCTAGAAATTCTCTACCTTGCCAATATCAACCTCATAGGTAACATACCAGATTCTATTGGAAACCTTATTTCCATCAAAAACTTTGATTTGTCTCAAAATTCCTTGTCTGGTAAAATCCCAGAAACCATTTCTGGTATGAAAAATGTTGAAAAAATTGTACTATTTGATAACAATCTTTCTGGTGAAATTCCACAAGGTTTAACAAATCTTACAAATTTGTTTCTATTAGACCTCTCTCAGAACACTCTCACCGGAAAATTGACGAAAGAACTCGCTTCGATGAATCTTTCTGTTCTTCACTTGAATGACAATTTTCTCAGTGGAGAAGTTCCAGAAAGTTTAGCTTTGAATCCAAATTTGCAGGATTTGTGTCTTTTCAACAATAGCTTTTCAGGGAAACTACCACAAGATCTTGGAAAATACTCTGCCATTGAAGAAATCGATGTTTCAACAAATAACTTCATTGGAGAGTTACCAAAGTTTCTCTGTCAAAAGAAGAAGCTTCAAAGACTTCTCACATTCAAAAACCGATTTTCCGGTTCTCTTCCTGATGAGTATGGTGATTGTGATTCTCTTCATTATGTAAGAATTGAGAACAATGAACTTTCTGGTTCAGTTCCAGCAAGATTCTGGAACCTGCCCAATTTTTCTCTTCTGAAAATGGATCATAACAGGTTTGAAGGTTCAGTCTCAGGTTCAATCAGAGCAAAGGGATTAATCAAACTAGTTTTAGCCGGTAATAGGTTTTCCGGTGAGTTTCCGGTAGGTGTCTGCCAACTTATTGAGCTTGTGCAAATTGACATTGGAAACAACAGGTTTACCGGTGAAGTTCCTACCTGCATAACCGGTTTGAAAAAGTTGCAGAAACTGAATATGCAGGGGAACATGTTCACCGGTAAAATTCCTAGTAATGTATCTTCATGGACTGAATTAACCGAGTTAAACTTGTCAAATAACCGGTTCACTGGTTCAATTCCACCGGAACTTGGTAATTTGCCTGGTTTAATATACCTTGATCTCTCCGTTAATTCTTTAACGGGGAAGATTCCGGTGGAGTTAACAAGCTTAAGGTTGAATCAGTTCAATGTTTCTGATAACAAATTGTCTGGTGAGGTTCCTTCGGATTTTAACCGCGAAGTTTACTTATCGGGACTAATGGGTAACCCGGGTTTGTGTAGCAATGTAATGAAAAACTTTCATTCTTGTTCAAAACATAGACCCTTTTCAGTTGTTGCAATAATTGTTTTATCTGCTTCTGTTGTGTTGATTTTTGTATCTGGTTTATGGTTCTTGAAGAAAAAGTCGAAATCTTTCGTTGGAAAATCTAAACGGGCTTTTATGACAACTGCATTTCAGAGAGTTGGGTTCAATGAGGAAGATATAGTTCCTTTTTTAACCAATGAGAATTTGATTGGAAGAGGCGGGTCGGGTCAGGTTTATAAAGTGAAAGTGAAAACGGGTCAAATAGTTGCTGTGAAGAAACTTTGGGGTTGTGGAACACAGAAACCTGATATAGAATCTGTGTTCAAGTCAGAGATTGAAACATTGGGTAGAATTAGACATGCTAATATAGTGAAACTGTTGTTTTGTTGTAGTGCTGATGATTTCAGAATTTTGGTTTATGAGTACATGGAAAATGGAAGTTTAGGTGATGTTTTGCATGAGGGGAAGTTTGAGGAATTGTTGGATTGGTCTAAGAGATTTGGAATTGCTTTAGGTGCTGCTAAAGGGTTAGCTTATTTACACCATGATTGTGTTCCTCCTATTGTTCATAGGGATGTTAAGAGTAATAACATATTGCTTGATCATGATTGTGTGCCTCGTGTCGCTGATTTTGGACTTGCTAAGACGTTGCAGCGCGACGCAAGTGAAGCTGCTATGTCTAGAGTTGCTGGTTCATATGGTTACATTGCTCCAGAATATGGTTATACATTGAAAGTGACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTGTTGATGGAATTGATAACTGGGAAGAGGCCAAATGACTCATATTTTGGTGAGAACAAAGATATTGTGAAGTGGATAACTGAGATTGCTATATCAACATCTCATGAAGTAGGAGGAAGTGACAACATTAGAGGAGGCCTAGATTGTGTTGTGACAAAGATTGTGGACCCAAGATTGAACTTGGATACTTGTGATTATGAAGAGGTTGAAAAGGTTTTGAATGTGGCTCTACTTTGTACATCAGCATTTCCAATTAATAGACCTTCAATGAGAAAAGTGGTTGAATTGCTTAAGGACCAGAAATTAGCTCGTCTCAAGTCATGA 3102 0.3756 MTQIQTTINTFKTSSFSSFLTLPKFYNMEKILILILLFSLLCSIGSTFSLSRDYEILLHVKNTQIDDQNKSLNNWLPNTEHNPCNWTGITCDSRNKSVISIDLSEIGIYGDFPFNFCRIPTLQNLSLAVNYLGNEISSHSMLPCSHLRVLNISDNLFVGNLPEFNAEIFQLRVLDASTNNFSGDIPASFGRFPHLKVLILSNNLFTGDIPASFGLFPQLNVLSLSGNFFTGTIPSILGNLSELTQFELAYTETMKPGPLPSQLGNLTKLEILYLANINLIGNIPDSIGNLISIKNFDLSQNSLSGKIPETISGMKNVEKIVLFDNNLSGEIPQGLTNLTNLFLLDLSQNTLTGKLTKELASMNLSVLHLNDNFLSGEVPESLALNPNLQDLCLFNNSFSGKLPQDLGKYSAIEEIDVSTNNFIGELPKFLCQKKKLQRLLTFKNRFSGSLPDEYGDCDSLHYVRIENNELSGSVPARFWNLPNFSLLKMDHNRFEGSVSGSIRAKGLIKLVLAGNRFSGEFPVGVCQLIELVQIDIGNNRFTGEVPTCITGLKKLQKLNMQGNMFTGKIPSNVSSWTELTELNLSNNRFTGSIPPELGNLPGLIYLDLSVNSLTGKIPVELTSLRLNQFNVSDNKLSGEVPSDFNREVYLSGLMGNPGLCSNVMKNFHSCSKHRPFSVVAIIVLSASVVLIFVSGLWFLKKKSKSFVGKSKRAFMTTAFQRVGFNEEDIVPFLTNENLIGRGGSGQVYKVKVKTGQIVAVKKLWGCGTQKPDIESVFKSEIETLGRIRHANIVKLLFCCSADDFRILVYEYMENGSLGDVLHEGKFEELLDWSKRFGIALGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHDCVPRVADFGLAKTLQRDASEAAMSRVAGSYGYIAPEYGYTLKVTEKSDVYSFGVVLMELITGKRPNDSYFGENKDIVKWITEIAISTSHEVGGSDNIRGGLDCVVTKIVDPRLNLDTCDYEEVEKVLNVALLCTSAFPINRPSMRKVVELLKDQKLARLKS* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5626 1033 Pfam Leucine rich repeat 578 636 IPR001611 GO:0005515
Tpr2g5626 1033 Pfam Leucine rich repeat 170 227 IPR001611 GO:0005515
Tpr2g5626 1033 Gene3D Ribonuclease Inhibitor 362 675 IPR032675 -
Tpr2g5626 1033 Gene3D Transferase(Phosphotransferase) domain 1 812 1031 - -
Tpr2g5626 1033 ProSiteProfiles Leucine-rich repeat profile. 578 601 IPR001611 GO:0005515
Tpr2g5626 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 857 869 IPR008271 GO:0004672|GO:0006468
Tpr2g5626 1033 ProSiteProfiles Protein kinase domain profile. 733 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5626 1033 SUPERFAMILY Protein kinase-like (PK-like) 733 1023 IPR011009 -
Tpr2g5626 1033 SMART serkin_6 733 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5626 1033 SUPERFAMILY L domain-like 362 525 - -
Tpr2g5626 1033 Pfam Leucine rich repeat N-terminal domain 52 92 IPR013210 -
Tpr2g5626 1033 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Tpr2g5626 1033 Gene3D Ribonuclease Inhibitor 52 168 IPR032675 -
Tpr2g5626 1033 Gene3D Ribonuclease Inhibitor 169 255 IPR032675 -
Tpr2g5626 1033 SUPERFAMILY L domain-like 18 164 - -
Tpr2g5626 1033 Gene3D Phosphorylase Kinase; domain 1 725 811 - -
Tpr2g5626 1033 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 31 189 - -
Tpr2g5626 1033 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 190 1028 - -
Tpr2g5626 1033 SUPERFAMILY RNI-like 150 630 - -
Tpr2g5626 1033 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 190 1028 - -
Tpr2g5626 1033 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 31 189 - -
Tpr2g5626 1033 Pfam Protein kinase domain 735 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5626 1033 Gene3D Ribonuclease Inhibitor 256 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5626 Tpr-Chr2 65119775 65124721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5626 53 1027 Receptor kinase-like Gene Family AT5G65710 53.715 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g5626 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5626 - - mtr:MTR_5g014720 1684.46