Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5624 ATGCGTTTCTTTCTTCTCCTTTTCTTTCTCTTCCATTTCCACCACCATATTCTCTCTGCTCCCATCTCAGAATACCGTGCACTTCTCTCTTTTCGTGAATCAATTACCGATTCTACCCCTCCCACACTCTCTTCATGGAACACTTCAACCACTCACTGTTCATGGTTAGGTGTAACATGCAACACACGCCGCCACGTCACCGCCTTAAACCTCACCGGACTTACTCTCTCCGGCGAACTTTCCGATCATCTCTCTCACCTCCCATTTCTCACAAATCTCTCACTTGCTGATAATAAATTCTCCGGTCCTATCCCTCCGCCGCTCTCCGCCGTCTCCGGTCTCCGGTATCTTAACCTCTCCAACAATGTCTTCAACGGAACTTTTCCTTCTGAGCTTTCTCAGCTGAAGAATCTCGAAGTTCTTGATCTCTACAATAACAACATGACCGGAACGCTTCCTCTTGCGGTGACGGAGCTTCCGAATCTCCGTCATTTGCATCTTGGAGGTAACTACTTTACCGGTCAGATCCCGCCGGAGTATGGACTATGGCAAAGGTTAGAGTATTTAGCTGTTTCCGGTAATGAACTTATCGGAACTATTCCACCGGAGATCGGAAACTTAACAAGTCTCCGTGAGCTTTACATCGGTTACTACAACACTTACACCGGCGGCATTCCGCCGCAGATTGGAAACTTAACTGAGCTTATCCGTCTCGATGCTGCTTACTGCGGTTTATCCGGCGAGATACCGTCGGAGATGGGGAAGCTTCAGAAACTTGACACACTGTTTCTTCAGGTGAATGCACTTTCTGGTTCCCTGACATGGGAGCTTGGAAACTTGAAAAGTTTGAAATCAATGGATTTGTCTAATAACATGTTAACCGGTGAGATTCCGACAAGTTTTGGTGAACTGAAGAATCTAACACTTTTGAATCTTTTTAGAAACAAGCTTCATGGTGCTATACCGGAGTTTGTCGGCGATATGCCGGGGTTGGAGGTTGTTCAGTTATGGGAAAATAACTTTACCGGTAACATTCCGGTGAGTTTGGGAACAAACGGAAGATTAACTCTTTTAGACATTTCATCAAACAAGTTAACTGGAACACTTCCACCTTATTTGTGTTCTGGGAATCATCTTCAAACTTTGATAACTCTTGGGAATTTTCTGTTTGGTCCAATTCCTGAATCTCTTGGTAATTGTGAATCTTTGAATAGGATTCGTATGGGTGATAATTATCTCAATGGTTCAATTCCTAAGGGTCTGTTTGGTTTACCAAAATTGACTCAAGTTGAGCTTCAAGATAATTATTTATCTGGAAATTTTCCTGAAACTCATTCTGTTTCTGTTAATCTTGGTCAAATTACTTTGTCAAATAATCAACTTTCAGGAACTTTGCCTCCTACTATTGGGAATTTTTCAAGCATGCAGAAGCTTCTTCTTGATGGTAACATGTTTTCTGGTAAGATTCCATCTCAGATTGGAAGGTTACAACAGCTTTCAAAGATTGATTTTAGTCATAATAAGTTTTCGGGTCCTATTGCTCCTGAGATTAGTCAATGCAAGCTTTTAACTTTCGTTGATCTTAGTCATAATGAGTTATCCGGGGTTATCCCGAATGAGATTACGGGTATGAGGATATTGAATTACTTGAATATTTCGAGAAATCATTTAGTTGGTAGTATTCCTGGTTCGATATCCTCAATGCAAAGCTTAACTTCTGTTGATTTTTCGTATAATAATCTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGTTACTTTAACTACACGTCTTTTTTGGGAAACCCTGATCTTTGTGGCCCTTATTTGGGTGCTTGTAAAGATGGTGTTGTTAATGGTGCTAACCAATCTCATCATGATAAGGGTCATCTTTCGTCTACTGTGAAGCTACTGCTTGTTATTGGGTTGCTTGCATGTTCCATTGTGTTCGCTATTGCAGCGATATTCAAGGCTCGGTCTTTGAAGAAGGCTAGTGAGGCTCGTGCATGGAAATTGACCTCGTTTCAACGTTTGGATTTCACTGCTGATGATGTTTTGGATTCCTTGAAGGAAGATAACATCATAGGAAAAGGAGGTGCTGGCATTGTTTACAAAGGGGCAATGCCGAATGGGGAACTCGTTGCTGTTAAAAGGCTTCCGGTTATGAGCAGAGGTTCTTCTCATGATCATGGATTCAATGCTGAGATTCAAACATTGGGGAGAATCCGACACAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCAAATCACGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGAAAGAAAGGTGGTCATTTATATTGGGATACAAGGTATAAAATTGCCGTGGAGGCCGCAAAGGGACTTTGCTATTTACACCATGATTGTTCCCCGCTTATTGTTCATCGAGATGTGAAATCAAACAACATCCTTCTTGATTCAAATTATGAAGCCCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGATTCCGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCTTATACATTGAAAGTTGATGAGAAAAGTGACGTGTACAGCTTCGGTGTTGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCAGTAGGAGAATTCGGTGATGGTGTGGACATTGTGCAATGGGTCAGAAAAATGACAGACTCCAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCAAGACTTTCCTCAGTTCCTCTTCATGAGGTCATGCATGTTTTCTATGTAGCCATTCTGTGTGTTGAAGAACAGGCAGTAGAAAGGCCAACTATGCGCGAAGTTGTTCAAATTCTGACAGAGCTTCCAAAGTCGCCCGATTCTAAACAAGGAGACTCGACAATCACAGAATCCTCTTTATCAACATCAAATGCTTTAGAATCTCCAACTTCAGCCTCTAAGGATCATCAACATCCTCCTCAATCTCCTCAATCGCCGCCACCTGATCTCTTAAGCATTTGA 3045 0.4181 MRFFLLLFFLFHFHHHILSAPISEYRALLSFRESITDSTPPTLSSWNTSTTHCSWLGVTCNTRRHVTALNLTGLTLSGELSDHLSHLPFLTNLSLADNKFSGPIPPPLSAVSGLRYLNLSNNVFNGTFPSELSQLKNLEVLDLYNNNMTGTLPLAVTELPNLRHLHLGGNYFTGQIPPEYGLWQRLEYLAVSGNELIGTIPPEIGNLTSLRELYIGYYNTYTGGIPPQIGNLTELIRLDAAYCGLSGEIPSEMGKLQKLDTLFLQVNALSGSLTWELGNLKSLKSMDLSNNMLTGEIPTSFGELKNLTLLNLFRNKLHGAIPEFVGDMPGLEVVQLWENNFTGNIPVSLGTNGRLTLLDISSNKLTGTLPPYLCSGNHLQTLITLGNFLFGPIPESLGNCESLNRIRMGDNYLNGSIPKGLFGLPKLTQVELQDNYLSGNFPETHSVSVNLGQITLSNNQLSGTLPPTIGNFSSMQKLLLDGNMFSGKIPSQIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSHNELSGVIPNEITGMRILNYLNISRNHLVGSIPGSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVVNGANQSHHDKGHLSSTVKLLLVIGLLACSIVFAIAAIFKARSLKKASEARAWKLTSFQRLDFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLYWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLHEVMHVFYVAILCVEEQAVERPTMREVVQILTELPKSPDSKQGDSTITESSLSTSNALESPTSASKDHQHPPQSPQSPPPDLLSI* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5624 1014 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Tpr2g5624 1014 Pfam Protein kinase domain 691 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5624 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Tpr2g5624 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1001 - -
Tpr2g5624 1014 SMART LRR_typ_2 159 182 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 568 591 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 496 520 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 353 376 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 135 158 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 280 303 IPR003591 -
Tpr2g5624 1014 SMART LRR_typ_2 304 328 IPR003591 -
Tpr2g5624 1014 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Tpr2g5624 1014 SUPERFAMILY Protein kinase-like (PK-like) 684 960 IPR011009 -
Tpr2g5624 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 984 - -
Tpr2g5624 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 1001 - -
Tpr2g5624 1014 Gene3D Ribonuclease Inhibitor 178 274 IPR032675 -
Tpr2g5624 1014 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Tpr2g5624 1014 Pfam Leucine Rich Repeat 282 304 IPR001611 GO:0005515
Tpr2g5624 1014 MobiDBLite consensus disorder prediction 965 1000 - -
Tpr2g5624 1014 Gene3D Ribonuclease Inhibitor 354 616 IPR032675 -
Tpr2g5624 1014 Gene3D Phosphorylase Kinase; domain 1 656 766 - -
Tpr2g5624 1014 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5624 1014 Gene3D Ribonuclease Inhibitor 275 353 IPR032675 -
Tpr2g5624 1014 Coils Coil 1011 1014 - -
Tpr2g5624 1014 MobiDBLite consensus disorder prediction 965 1014 - -
Tpr2g5624 1014 SUPERFAMILY L domain-like 349 610 - -
Tpr2g5624 1014 SMART serkin_6 689 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5624 1014 SUPERFAMILY RNI-like 69 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5624 Tpr-Chr2 65096560 65101270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5624 14 1014 Receptor kinase-like Gene Family AT5G65700 79.225 0.0 1595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g5624 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5624 - - ccaj:109800149 1741.47