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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tpr2g5623
ATGATGGAAATTATGTCTCCTATCTATTTGCCTGAACTTGGAATGGAGGATCTCAACTTCTTGCACCAATACCCTATGGATTCTCTTGCATCGGATGCATTTGACAACTTTGGATTTCACTTTGACAACAACTACGAAACAACACCAAATTGTTTCCCAGTTGAAACTCATCAACCTAATGATAACTACGTTGCTCAAACAAGACCAACTAAGAAGATAAAGACATCGTCAACCAATCCTTCTTCCTATTCATCAACACCTCAACTCATTTCATTTGAACAATTCAATGCAACACCAATTGTTTCTAATAAGGAATTTTACGGCCTTGATTATTCCGATGTAAAGCCTAAAATCGAGAAAGGGTGTAGTAAAAACAAGGATTTTCCGGCAAATTATGATAATCGAGCGAATCAGACTAGAAATACAACTCAAGCTCAAGAACATGTAATGGCCGAAAGAAAACGAAGGGAAAAGCTCACTCGAAGTTTCATTGCTCTTTCGGCCATCGTTCCTGGCCTAAAGAAGATGGATAAAGCATCTGTATTGGGAGATGCAATCAAATATATGAAACAACTAAAAGCACGTTTACAAACTCTTGAGGAACAAGTTGAAGACAACAAAAAAGTTGGATCCACAGTTCAAGTCAAGAGATCTGTTATCTTCATTGATAATAATGACCATGATGACAACAACAAGAGGACACTTCTTCCTGAAATCGAAGTAAGAGTTTCAAGTAAAGATGTACTCATCAAGATTCAATGTGATAAACAAAGTGGACGTGCTGCTACGGTGTTGGGCCAATTAGAAAACCTTAATCTCATTGTTCAAAGTAGTAACTTTTTGCCCTTTGGAAACAACATGCTTGATGTAACTATTGTTGCTCAGATGAACAAGGAAAACTGTGTGACTGCAAAGGATCTCCTAGGAAGCATACGACAGGCTTTGATCAATTGA
954
0.3763
MMEIMSPIYLPELGMEDLNFLHQYPMDSLASDAFDNFGFHFDNNYETTPNCFPVETHQPNDNYVAQTRPTKKIKTSSTNPSSYSSTPQLISFEQFNATPIVSNKEFYGLDYSDVKPKIEKGCSKNKDFPANYDNRANQTRNTTQAQEHVMAERKRREKLTRSFIALSAIVPGLKKMDKASVLGDAIKYMKQLKARLQTLEEQVEDNKKVGSTVQVKRSVIFIDNNDHDDNNKRTLLPEIEVRVSSKDVLIKIQCDKQSGRAATVLGQLENLNLIVQSSNFLPFGNNMLDVTIVAQMNKENCVTAKDLLGSIRQALIN*
318
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tpr2g5623
317
Pfam
Helix-loop-helix DNA-binding domain
146
193
IPR011598
GO:0046983
Tpr2g5623
317
PANTHER
BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN
2
316
-
-
Tpr2g5623
317
SMART
finulus
149
198
IPR011598
GO:0046983
Tpr2g5623
317
Coils
Coil
182
209
-
-
Tpr2g5623
317
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
147
205
IPR036638
GO:0046983
Tpr2g5623
317
PANTHER
BHLH TRANSCRIPTION FACTOR
2
316
-
-
Tpr2g5623
317
Gene3D
-
133
208
IPR036638
GO:0046983
Tpr2g5623
317
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
143
192
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tpr2g5623
Tpr-Chr2
65066398
65069803
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tpr2g5623
2
317
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT4G37850
35.294
2.11e-55
181
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Tpr2g5623
HLH
2.2e-09
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tpr2g5623
-
-
cam:101507557
342.813
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