Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5573 ATGAAGTGTTTTTTCTTCAAACATAAATCAAAATCAGACCCAGATTTAAACCATAAAAAGAAGAAAAACAATGCAACAAAAAAATCTACTAGTGCTCATTCATCACCAAGGAGTATAAAAGAGTTGTACAAAGAGAAGGAACACAATTTCAGAGTTTTTACACTAAGGGAGCTTATAAATGCAACAAATGGTTTCAATAAGGTGCTGAAAATTGGAGAAGGAGGTTTTGGTAAAGTATATAGAGGAACAATTACTCCTGAAAATGGAATTGGTAACTCAATTGTGGTTGCAATAAAAAAACTCAACACTCGTGGATTTCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGAATTGTGAATCATCCAAATTTGGTTAAGCTTTTGGGATATTGTTCTGTTGATGGTCAGAGTGGAATCCAACGGTTGTTAGTGTATGAGTTTATGCCTAATAGGAGTTTAGAAGATCATCTTTTCAGTCGTTCATTACCTCTTTTGCCTTGGAAAACAAGATTACAGATCATGCTTGGTGCTGCTCAAGGATTACAGTATCTACATGAGGGATTGGAAATTCAGGTGATCTATAGAGATTTCAAATCATCAAATGTGCTGTTGGACAAGGAATTCCATCCTAAGCTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACAGGTGACAAGACTCATGTCTCTACTGCGGTAGTTGGGACAAGGGGCTATGCTGCACCAGAGTATCTTGAAACAGGTCATCTAAAATCAAAGAGTGACGTTTGGAGTTTTGGTGTAGTATTGTATGAGATTCTCACAGGAAGACGAACAATTGAAAGAAATCTTCCGATAGCGGAACAAAAGCTTATAGAATGGGTTAAAAACTACCCTGCTGATACTAGCAGATTCAGCTTGATTATAGACCCTCGACTCACGAAACAATATTCTCTTGATTCAGCTAGGAAAATTGCTAAGTTGGCAGATAGTTGCTTGAAGAAGAATGCTGAAGATAGGCCATCAATGAGTCAAGTAGTGGAAAATTTGAAACAAGCATTGGAATGTTCATAA 1062 0.3748 MKCFFFKHKSKSDPDLNHKKKKNNATKKSTSAHSSPRSIKELYKEKEHNFRVFTLRELINATNGFNKVLKIGEGGFGKVYRGTITPENGIGNSIVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGQSGIQRLLVYEFMPNRSLEDHLFSRSLPLLPWKTRLQIMLGAAQGLQYLHEGLEIQVIYRDFKSSNVLLDKEFHPKLSDFGLAREGPTGDKTHVSTAVVGTRGYAAPEYLETGHLKSKSDVWSFGVVLYEILTGRRTIERNLPIAEQKLIEWVKNYPADTSRFSLIIDPRLTKQYSLDSARKIAKLADSCLKKNAEDRPSMSQVVENLKQALECS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5573 353 Gene3D Phosphorylase Kinase; domain 1 44 150 - -
Tpr2g5573 353 MobiDBLite consensus disorder prediction 6 38 - -
Tpr2g5573 353 PANTHER OS01G0588500 PROTEIN-RELATED 15 351 - -
Tpr2g5573 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Tpr2g5573 353 ProSiteProfiles Protein kinase domain profile. 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5573 353 PANTHER RECEPTOR-LIKE KINASE PLANT 15 351 - -
Tpr2g5573 353 Gene3D Transferase(Phosphotransferase) domain 1 151 352 - -
Tpr2g5573 353 SUPERFAMILY Protein kinase-like (PK-like) 47 346 IPR011009 -
Tpr2g5573 353 ProSitePatterns Protein kinases ATP-binding region signature. 71 100 IPR017441 GO:0005524
Tpr2g5573 353 CDD STKc_IRAK 71 348 - -
Tpr2g5573 353 PIRSF ILK 14 353 - -
Tpr2g5573 353 Pfam Protein kinase domain 66 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5573 353 MobiDBLite consensus disorder prediction 6 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5573 Tpr-Chr2 64451262 64454245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5573 3 346 Glycoside Hydrolase AT3G07070 42.857 1.28e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g5573 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5573 - K00924 gmx:100305390 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5573 2 64451262 64454245 Tpr2g5573 2 64451262 64454245 ECH
Tpr2g5573 2 64451262 64454245 Tpr5g2564 5 47680175 47683505 PCT