Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5567 ATGGAGAAACGTTACGAGGTAATGCATGTGCTTGGTTCCGGCTACTATGGTGTGACTAAGCTGGCCAAAAACATCAAAACAAGAGAACATGTTGCTATTAAATACATTGAAAGAGGAAATAGGATTGATAAGAATGTCGAAAGGGAGATAATTAATCATAGATCTTTAAGCCATCCACATATCATCAAGTTTAAAGAGGTATTTGTGACACCTACACATTTAGCAATTGTTCTTGAGTATGCTGCTGGTCGTACACTTTTTGCTAGTCTGTGCTCTGCTAGTAGATTCAGTGAAGATGAGGTAAGATATTTCTTTCAACAACTAATATCTGGAGTCTACTACCTTCATTCCATGCAAATTTGTCATAGAGATTTGAAATTGGAGAACTCTCTATCGGATGGAAGTCCAGCTCCTCGACTCAAAATTTGTGACTTTGGATCATCTAAGTCTTCTTTACTGCACTCTGCACCTAAATCAATGGTTGGAACTCTTGCATACGTTGCACCAGAGGTTTTGTCTAGACAGGGGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGTGTTACTCTTTATACCATGTTAGTTGGATCATACCCATTTGAAGATCCACAAGATCCTCAAAATTTCGCAAAGATTATGAAGAAAATAATTAATGTTGAATACTCCATACCTGACAAGGTACATATATCTGCGGAGTGTAGGCAGCTCCTCTCTAGTATCTTTGTTGTCAATCCAGCTAAGAGGATTATAATCTCAGCAATAAAACAACACCCTTGGTTTTTGAAGAACTTGCCTAGAGAAGTTATTCAGGCTGATAGAAAATGTTACAAAGAAACACCAGACCAATTATCAAGCCAACAAAGTGTGGAAGAAATCATGCGAATTGTCCAAGAAGCAAGAACAACACCTAGACCAAGTTCACAGGATCAAGATTGTCAGAATTTTATTTTTACGTCAACTCGTTTTGGTTAA 978 0.3783 MEKRYEVMHVLGSGYYGVTKLAKNIKTREHVAIKYIERGNRIDKNVEREIINHRSLSHPHIIKFKEVFVTPTHLAIVLEYAAGRTLFASLCSASRFSEDEVRYFFQQLISGVYYLHSMQICHRDLKLENSLSDGSPAPRLKICDFGSSKSSLLHSAPKSMVGTLAYVAPEVLSRQGEYDGKIADVWSCGVTLYTMLVGSYPFEDPQDPQNFAKIMKKIINVEYSIPDKVHISAECRQLLSSIFVVNPAKRIIISAIKQHPWFLKNLPREVIQADRKCYKETPDQLSSQQSVEEIMRIVQEARTTPRPSSQDQDCQNFIFTSTRFG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5567 325 Gene3D Transferase(Phosphotransferase) domain 1 81 270 - -
Tpr2g5567 325 SUPERFAMILY Protein kinase-like (PK-like) 3 308 IPR011009 -
Tpr2g5567 325 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Tpr2g5567 325 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Tpr2g5567 325 PANTHER SERINE/THREONINE KINASE 3 307 - -
Tpr2g5567 325 ProSiteProfiles Protein kinase domain profile. 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5567 325 Pfam Protein kinase domain 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5567 325 SMART serkin_6 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5567 325 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5567 Tpr-Chr2 64388611 64391555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5567 4 266 CBL-interacting serine-threonine protein kinases AT5G25110 40.876 2.06e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g5567 Pkinase 2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5567 K14498 - vvi:100243594 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5567 2 64388611 64391555 Tpr2g5567 2 64388611 64391555 ECH