Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5566 ATGGAATCAATCAATGTCGTAATTGATGATACTGATTTGAAAAGTATAGATTCAGCTGAAGAGACAGATGTAGTCACACCTGTCCCAACACCAGATGATGATCAAGCTGAATCTGATTATGTTCAAGACTTTGAGCCTAATACAGAGAATTTGAGACCAAACAAAGGTCCATCAATCAGAGTTCAGAAGAACCACTCAAAGGAAATCTCTATTAGAAATCCTGACCAAGGAGTTACCATAAGAAGATCTACATATGTAATTCCCAAGAATTTGAAAGAAGAAGCTCAATCTAGAAAATTAAGGGGCAAGCTAAGGAAATGTGATATGAACTCTTCTCCTAAAGTTAATGTTAATGTTGGTACTTTTGGTAAAGTCATGATTGACTATGTGATTGATTGGCTCAAGAAAACCGTTCTTGAGACTAATGTTGTGCAAGATGTTGACACATCTTTGGCCCGAGAGAATACACAAGGTGTTGGCACATCTGTCCAGGCTGGAGCACTTTCAAGGAAGCAGATGATTGCTGATCTTACTGAGACTAGCAGAGCCCTTGAGGCTAGAAAATTAAAAATTGATCGTGTGATTGAGGCACTAAAGGCTGAGGAGGCTGCTGAGACTGTTGAGGGTGAGCCCAATGGACAAGAAGGAGAAGGAACTAGTGGCTCTGAGGATGGCTCTGAGGATTTGATAATGGAGGAACAACGTTACGAGGTAATGCATGTACTTGGTTCCGGCAACTTTGCCGTGACTAAGTTGGCCAAAAACATCGAAACCGGAGAACTTGTTGCTATCAAGTACATTCAAAGAGGAGAGAAGATCGATGAGAATGTTGAAAGGGAGATAATTAATCATAGATCTTTAAACCATCCACATATCATCAATTTCAAAGAGTTATTTGTGACACCCTCTCATTTGGCGATTGTCCTTGAATATGCTAATGGTGGTGAACTATTTCATAGGATAGCCTCTAACATTATCCCTAAGGGTCGCATTACTGAAAAGGAGGCAAGATATTTCTTCCAGCAACTAATATCTGGAGTCCAGTACATGCATTCCATGCAAATTTGTCATAGGGATTTGAAATTGGAGAACACTCTATTGGATGGAAATCCAAGAACTCCTCAACTCAAAATTTGTGACTTTGGTTACTCTAAGTCTACTCTGCTGCACTCTCGACCCAAATCAGTGGTTGGAACTCCTGCATACATTGCACCAGAGATTTTATCTAGACAGTCACAGGAGTATGATGGAAAGCCTGCGGATGTTTGGTCATGTGGTGTTATTCTTTATGTCATGCTAGTTGGATCATACCCATTTCAAGATCCAGAAGATCCTAAAAATTTCAGAAAGATTATTAAGAAAATAGTGGATGTTCAATACTCCATACCTGGCTATGCATGTATATCTGCAGACTGTAGGCATCTCCTCTCTAGGATTTTTGTTGCCAATCCAGCTAAGAGGATCACGATCCCAGAGATACAACAACACTCTTGGTTTTTGAGATACATGCCTAAAGAAACTGTTGAACCTGGTAGAAAATGTTACCAAGAAACAGAAAATGATGAATTACCTAGGCAACAAAGCGTAGAAGAAATCATGCAAATTCTACAAGAAGCAAGAACAACATATGTTGCTAATGTTAACGTTGATGGGAATGTTGAAGAGAAAGTTGTTGATGTTAATTGTGATGACTTTGTGAAAGTGGAACTTGTGTGA 1716 0.3939 MESINVVIDDTDLKSIDSAEETDVVTPVPTPDDDQAESDYVQDFEPNTENLRPNKGPSIRVQKNHSKEISIRNPDQGVTIRRSTYVIPKNLKEEAQSRKLRGKLRKCDMNSSPKVNVNVGTFGKVMIDYVIDWLKKTVLETNVVQDVDTSLARENTQGVGTSVQAGALSRKQMIADLTETSRALEARKLKIDRVIEALKAEEAAETVEGEPNGQEGEGTSGSEDGSEDLIMEEQRYEVMHVLGSGNFAVTKLAKNIETGELVAIKYIQRGEKIDENVEREIINHRSLNHPHIINFKELFVTPSHLAIVLEYANGGELFHRIASNIIPKGRITEKEARYFFQQLISGVQYMHSMQICHRDLKLENTLLDGNPRTPQLKICDFGYSKSTLLHSRPKSVVGTPAYIAPEILSRQSQEYDGKPADVWSCGVILYVMLVGSYPFQDPEDPKNFRKIIKKIVDVQYSIPGYACISADCRHLLSRIFVANPAKRITIPEIQQHSWFLRYMPKETVEPGRKCYQETENDELPRQQSVEEIMQILQEARTTYVANVNVDGNVEEKVVDVNCDDFVKVELV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5566 571 Pfam Protein kinase domain 236 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5566 571 SMART serkin_6 236 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5566 571 PANTHER SERINE/THREONINE KINASE 234 558 - -
Tpr2g5566 571 Gene3D Transferase(Phosphotransferase) domain 1 312 506 - -
Tpr2g5566 571 SUPERFAMILY Protein kinase-like (PK-like) 231 517 IPR011009 -
Tpr2g5566 571 Gene3D Phosphorylase Kinase; domain 1 218 311 - -
Tpr2g5566 571 ProSiteProfiles Protein kinase domain profile. 236 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5566 571 MobiDBLite consensus disorder prediction 15 36 - -
Tpr2g5566 571 MobiDBLite consensus disorder prediction 202 225 - -
Tpr2g5566 571 ProSitePatterns Protein kinases ATP-binding region signature. 242 265 IPR017441 GO:0005524
Tpr2g5566 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Tpr2g5566 571 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 234 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5566 Tpr-Chr2 64363458 64373690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5566 235 509 CBL-interacting serine-threonine protein kinases AT4G24400 41.754 2.83e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g5566 Pkinase 1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5566 K14498 - gmx:547797 446.047