Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5564 ATGAATTTTCAACAACTTCCTCATCTCTTTCTACAAGAGATTCCTAACTTAGGAGGAGGAACTTTCAGTGTAATGAAGGGTATTAAGAAGGAAGAAGCTAGATGCGCACAAATGACAATTTTTTATGATGGGAAAGTGATTGTTCTTGATGATGTTCCAGCTGAAAAAGCTAAGGATATTATGGTCTTTTCCACTAACAACTATGCTGTTTATCCCTCATTTCTTGGTGGAAACTCTGGCAATAAGACTATTCATGTACCATCTACAGTACCACCTGTTATTTATGATTTACCGATGACTAGGAAAGCTTCACTTCATCGATTCTTGGAGAAAAGGAAGAATAGAATTGCTGCAAGGGCACCATATCAAGCAACTTATCAAGCAGCAACCCTTAATAAGACAATTGATGAATCCATGGCATGGCTCTCCTTGACACCACAATCACCACAACACAAATCTGAGTGTAGCTCCACTGCAATGTTATTTTAA 489 0.3804 MNFQQLPHLFLQEIPNLGGGTFSVMKGIKKEEARCAQMTIFYDGKVIVLDDVPAEKAKDIMVFSTNNYAVYPSFLGGNSGNKTIHVPSTVPPVIYDLPMTRKASLHRFLEKRKNRIAARAPYQATYQAATLNKTIDESMAWLSLTPQSPQHKSECSSTAMLF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5564 162 Pfam tify domain 36 61 IPR010399 -
Tpr2g5564 162 PANTHER PROTEIN TIFY 10A 29 145 - -
Tpr2g5564 162 ProSiteProfiles Tify domain profile. 31 66 IPR010399 -
Tpr2g5564 162 SMART tify_2 31 66 IPR010399 -
Tpr2g5564 162 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 145 IPR040390 -
Tpr2g5564 162 Pfam Jas motif 98 123 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5564 Tpr-Chr2 64355815 64357369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5564 30 144 Tify Gene Family AT1G19180 37.405 4.82e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr2g5564 tify 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5564 K13464 - gmx:100306332 132.494