Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5549 ATGTGCCGGCAAAATTCTCCGGTGCATAATTCCGGTGATGAAGAACTTACAGCTGATGAAAGTCTTTTGGTTTATTGCAAACCTGTTGAATTCTACAATATTCTCTATCGTCGTTCTCTTCATAATCCTACTTTTCTTAGGAGATGTTTGCGCTATAAAATAAAAGCAAAGCGTAAAAGGAGGGTGCGAGCAGGAATTGTGATTTTCAACTATAGGGACTGTTACAACATGCTTCGGAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTGATGCAGTGTGCGAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTGTTCAATTTTGAGTTCTGGGTTACTGATGATTACCAAGCAGTGAACGTCTCTGTAAAAATTGACATACTGAGATCAGAGAATGTTGCTGATGGAGTAATTCCACAAACACAACCCTTCTTCTTCTGTTCTAGACCTCGAAAGCGTAGACCAAAAAGCTCTTTTAAAAATCAGAAGCACACCAATATAAAGTTCTTGAAGTTGGATTCACCAGAAGGCATACAAAATGGGACTCTACAGAAAGACGATGATATCCTGTCATGCAAAGGGGAGAATATGTCTAGAGCATCTCATAGTGAGAAGAATTTGCAGAATGAAGGAAATGGTGGGGTAAAATTTGGTCCTGATCATCCTAGCACCATGGATTACGTTGAGCATGTAGAATCTAGTTTTAACATTCCAGGTGTTTCAATTGCCATGCCCCAATCTTCGGAGGACCCTGAATGTAGCAAATCTGTATATAAAAGTGATCCTGCTCTGCCTACTAAAGCAAAGAAGTTAAATACGGACCGTTCAGACTCAAAAAACCGGATGCTCCTGCAGAAGAGGCAGTTCTTTCACTCACATAGAGTTCAGCCCATGGCATTAGACCAAGTGTTATCAGATCGTGATAGTGAAGATGAAGTTGATGATGGTGTTGCTAACCTGGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTACTGGCTGATGGTCATGTTCCGTGGGCTTGTGAGGCATTTTCCAAGCTTCATGCAAAAGAGCTGATTTCGTCCCAAGCTTTATTTTGGTGTTGGAGATTATTCATGATCAAACTTTGGAATCATGGTCTACTTGATGCTTGCACAATGAACAACTGCAATATAATATTAGATAACTACAAAAACGGGGGATCGGATACTGGTACAGATTGA 1287 0.4025 MCRQNSPVHNSGDEELTADESLLVYCKPVEFYNILYRRSLHNPTFLRRCLRYKIKAKRKRRVRAGIVIFNYRDCYNMLRKTEVTEDFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTDDYQAVNVSVKIDILRSENVADGVIPQTQPFFFCSRPRKRRPKSSFKNQKHTNIKFLKLDSPEGIQNGTLQKDDDILSCKGENMSRASHSEKNLQNEGNGGVKFGPDHPSTMDYVEHVESSFNIPGVSIAMPQSSEDPECSKSVYKSDPALPTKAKKLNTDRSDSKNRMLLQKRQFFHSHRVQPMALDQVLSDRDSEDEVDDGVANLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHAKELISSQALFWCWRLFMIKLWNHGLLDACTMNNCNIILDNYKNGGSDTGTD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5549 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 425 - -
Tpr2g5549 428 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
Tpr2g5549 428 PANTHER POLYCOMB GROUP PROTEIN 61 425 - -
Tpr2g5549 428 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
Tpr2g5549 428 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5549 Tpr-Chr2 64246404 64253901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5549 1 68 C2H2 Transcription Factor Family AT5G51230 52.941 3.12e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5549 - - mtr:MTR_5g013150 779.63