Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5530 ATGACGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTATTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACACGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTTTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGACTCTAGAGCAGTGTGTCAGTCTCTTAAGGAATGAGGATGTTAGACCGAAGGTGATTGTCACCGATAGGGATTTGGCTCTGATGAATGCAGTTTCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTCCATGTAAAAAAGAACGTGAGCTCTAAGATGAAGGAAATTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGATGCTTTTAATGATGTGTTAGAGTCGCCAACGGAAAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTCTGTGCGAGATGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAGGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATAAGTCAGTTCACTGAAGTACAAGGTGAATTCAGTCGGAGTATGTCTGTTGCGGAACACAGATACGATGATGATCCTCTTTACGCATTCTTGTTTTATAAAATCTCAAGAAAGGCTATGGATCACATTTATGACGAAGCAAACAGGGTCGAAGAATGTGGTATGGATAGCAAAAAGTGTGGCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACCTATCCGACTGGATGAGATTCACCCTCAAATGGAAGAAACTGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGATTCAAAAGGCCAAAACAAAAGGTGCTAGAAAGAAAAAATCAGTTCGTGTCACAAGATACACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAGTCGCAACCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGAGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCACCTCCAGCACCTCCTGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATTGAAGATATTATTGACGTTCAAGGTGACGGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAAATCAACAAGATTATGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTCGATACTGAGCGTTACAAGTATGTCACGGATGCACTTTTCCCACCACCGAGAAGGAGTAAACATGCTATTGCAACCAAGGACAAATGGTTTACTTTTCCGGATATGGGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTATCAAATATGGAAAGGTGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCATCAGACACGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGATTGAAAGTAGGATGTCCGATACCTCCAATGGCTCATCAGTGGAAAAACTCTTGTTCCGAAGAAGCTGCAGAATGGGAGCCCATGTTTTTGGATAGAATGCAAAAGTTTGGTGAGCTGTTGACCATTGAAAGAGCAGGCGATGACTTAGTCACGATTGGAAAGGGTAGCAAAGACGATCCGTTGGAATTGTAG 2712 0.4277 MTGKRELVLGICAPGIIEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNFFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWTLEQCVSLLRNEDVRPKVIVTDRDLALMNAVSEVFPTSAAMVCRFHVKKNVSSKMKEIVKIKNGENEKQTDVWDQITDAFNDVLESPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKERVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLISQFTEVQGEFSRSMSVAEHRYDDDPLYAFLFYKISRKAMDHIYDEANRVEECGMDSKKCGCVMRRTYGLPCACLIAKKIKNNKPIRLDEIHPQMEETERLKTADVSVKNDIRNQLRLIAYPETTSVKPPIQKAKTKGARKKKSVRVTRYTSRDKSRWEHVDDHIAATQASQSQPTKSKPSTSQTVPEVPKELVISTLTPAPPAPPEIPFINHMPKFMHPFIEDIIDVQGDGYCGYRVVALHQKGNQQDYELIRLNMERELRLHKESYVELFDTERYKYVTDALFPPPRRSKHAIATKDKWFTFPDMGYVVATHFQRVVVQLSNMERCGASRTCFPLRGKPPSDTSDLDSKIICIGALADHFVLVRLKVGCPIPPMAHQWKNSCSEEAAEWEPMFLDRMQKFGELLTIERAGDDLVTIGKGSKDDPLEL* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5530 903 Pfam Transcription factor AFT 89 138 IPR014842 GO:0000981|GO:0036086
Tpr2g5530 903 Pfam MULE transposase domain 255 351 IPR018289 -
Tpr2g5530 903 MobiDBLite consensus disorder prediction 641 662 - -
Tpr2g5530 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 555 IPR031052 GO:0006355
Tpr2g5530 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5530 Tpr-Chr2 64056414 64059339 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5530 MULE 2.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5530 - - gmx:100800409 549.666