Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5519 ATGAGCAATTACGCCGTCGCTACCACCGTCGTAACGAGCCAACACAACGTTTCTACTACTGTTAATGGTCAAGAAAACATGAATTCATCATTACCAAATTGTGTCGATAGTTTGGTGAACAATATCCAGGAACAAAATGTGCAACAAAGTATTGCCAACAGTGAACCTCACTTGGAAATGGAGTTTGAATCTGAGGCATCGACTTATGATTTTTATAATGCGTATAGTAAAACAATTGGATTTGGTATTCGTCGAGAATATGGAAATAAAAGCAGAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGTTTCAAAGAGGGTATACGAAGTGTTGACAAAAGATGTCACTCGACAGCGGAGCCTAGAGCAGAAACTAGAACAGGGTGTCAAGCGCGTATGGCTATTTCACTTGATCGAAAGATAGGGAAATACAAGGTTGTTGACTTTATAGCTAAACATAACCACCCTCTTCAACCGCCAGAGCATGTTCACATGATTCGCTCTCATCGACGCATATCTGAGGCACAAGCATCACAAATTGTCTTAGGAGATGAATCAGGATTAACACCAAAAGATTTGCACGAATATATATCCAAACAAGCTGGTGGGATAGAGACTGTTGGTTTTACAAGAGAAGACCTTAAGAATTACCTTAAAACCAAAAGGAAGCAATCACTAAAGTATGGTGAAGTAGGTGCATTGATGATGTATTTCAAACAAGAAAGTGAAAATCCCTCGTTCTTTTATGACTTTCAAATGGATGTGGACGAGCTAATAACTAACATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTCATAACATTTGATACCACATACAAGACAAATAAGGATTGTTGGCCATTAGGAGTATTTGTTGGACTTAATAATCACAGGCAAACAGTCATTTTTGGGGCAGCATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTATTTGAAACCTTCCTCAAAGCGATGGGTGGAGCAAAGCCTAAAACTATGTTAACCGATCAAGATCCTGCTATGGCTAGGGCACTTTCTATAGTTATGCCGGAAACATTTAATGGATTGTGCACTTGGCATATAAGACATAACTCTTTGAGGCATGTGAATCATTTATATCAACAGAGTTCACGATTTTGTGGGGATTTTGTTATATTATGCAGCAACAAGCTACAATTCAGGGGACACAATCAAGCCAAGTTGACAATGAAACTCAACATCAAGTTACAATTCAAGGGACACAATCAAGCCAAGTTGACAATGGAACTCAACATCAAGTTACAATTCAAGGGACACAATCAAGCCAAGTTTACAATGAAACTCAACATCAAGTTACAATTTAAGGGACACAAGGGACACAATCAAGCCAAGTTGACGGTGGAACTCAACATCAAGTTACAATTCAAGGGACACAATTAA 1449 0.383 MSNYAVATTVVTSQHNVSTTVNGQENMNSSLPNCVDSLVNNIQEQNVQQSIANSEPHLEMEFESEASTYDFYNAYSKTIGFGIRREYGNKSRVDGVLTSRRFTCFKEGIRSVDKRCHSTAEPRAETRTGCQARMAISLDRKIGKYKVVDFIAKHNHPLQPPEHVHMIRSHRRISEAQASQIVLGDESGLTPKDLHEYISKQAGGIETVGFTREDLKNYLKTKRKQSLKYGEVGALMMYFKQESENPSFFYDFQMDVDELITNIFWADAQMINDYGYFGDVITFDTTYKTNKDCWPLGVFVGLNNHRQTVIFGAALLYDETIPSFQWLFETFLKAMGGAKPKTMLTDQDPAMARALSIVMPETFNGLCTWHIRHNSLRHVNHLYQQSSRFCGDFVILCSNKLQFRGHNQAKLTMKLNIKLQFKGHNQAKLTMELNIKLQFKGHNQAKFTMKLNIKLQFKGHKGHNQAKLTVELNIKLQFKGHN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5519 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 397 IPR031052 GO:0006355
Tpr2g5519 482 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
Tpr2g5519 482 Pfam MULE transposase domain 280 374 IPR018289 -
Tpr2g5519 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 21 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5519 Tpr-Chr2 63976789 63978727 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5519 MULE 5.3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5519 - - cam:101500125 625.55