Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5454 ATGGTGGATTTGGTTCTTCTTCATCTTTTACTTAATTTAGAGGAATCAATTGTAGAACTGTTTAAACTGGGTTGGGTTCTTAGTGTGGAGAAATTTGATTACTTCAACTGTGACACAAGTGCACCAATCACTACTTTCACCAATGGAAAGAGCACTTTTAATCTTGACAGATCAGGACCTTTCTATTTCATAAGTGGAACTGATGATCATTGCAACCATGGCCAAAAATTGCTCGTTGAAGTTATGGCGCCGCATTCAATTCCAGCATCTCCACCTACCACCATTGCAGTTCCGCCTGAAGGTTCATCACCGATCATGGCTCCTTCGGATTCACCTTATTCTTCTGATTCCGTGGATCAGGCTACTTCATCTTCCACCATGGTGCTTGCTTCAAGTTTTCTGTCTACTTTGATCACATTTGGAATTGTGATGATGTTAGCACTCTAA 447 0.4094 MVDLVLLHLLLNLEESIVELFKLGWVLSVEKFDYFNCDTSAPITTFTNGKSTFNLDRSGPFYFISGTDDHCNHGQKLLVEVMAPHSIPASPPTTIAVPPEGSSPIMAPSDSPYSSDSVDQATSSSTMVLASSFLSTLITFGIVMMLAL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5454 148 PANTHER EARLY NODULIN-LIKE PROTEIN 2 26 99 - -
Tpr2g5454 148 PANTHER BLUE COPPER PROTEIN 26 99 IPR039391 GO:0009055
Tpr2g5454 148 SUPERFAMILY Cupredoxins 25 82 IPR008972 -
Tpr2g5454 148 ProSiteProfiles Phytocyanin domain profile. 1 83 IPR003245 GO:0009055
Tpr2g5454 148 Pfam Plastocyanin-like domain 26 75 IPR003245 GO:0009055
Tpr2g5454 148 Gene3D - 21 82 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5454 Tpr-Chr2 61544209 61547277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5454 26 86 Phytocyanin Superfamily AT1G79800 55.738 3.60e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5454 - - gmx:100783893 134.806