Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5452 ATGCAAAATAATTCTCCCGACGGCGGCTCCGGTTGCCGGACGGTGGTGGTCGGAGTAAAAATGGATTCTCCAAGCAAAGAGCTTCTCACTTGGGCTTTGGTTAAAGTTGCTCAACCTGGTGATCTTGTTGTTGCTCTGCATGTTCTTGGGACAAATGAAATTGTTAATGGAGATGGGAAATCGTCGCTGCTTTCTCTTGTTAAGTCATTTGACTCTGTTCTTAATGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGATCTTAAGCTAAAAATTTGCCGAGGTTCATCGGTGAAGAAAATTTTGGTACGAGAAGCGAATGCTTATTCTGCAACTCATGTTATTGTTGGAAGTGTTCATAGACACCATAGAATCCGGTCATCGAGCTCTGTAGCTAAGTACTGTGCTAGAAAGTTATCTAAGGACTGTTGTATTCTTGCTGTTAATAATGGGAAAGTTGTGTTTCAGCGCGACAGCTTGGCAGCATCGATTCCTGTTGCTGATGTACAAGGGTTGGATCGTCATCACGGAAATGGTTTGCTTGGTTCAATTCATTGGACACTAAGTAAAAGTACAAAAGTACAAAATGATGATGCTGATGAGGGAACCAGACGAATTTCGGATCACAGTTTAGCTAAGGTTTTGCTTGATTCTACAGAAAATGTTAAACATCATAGTTGTTCAATTTGTGGCGCATTGCAAGACACTTCTTGCCACCAATCTGCAGACGAGCCTTCAGAAGGATCTGAACGCTCTTCTGTTGATGGTGGCAATGAGAATTCTATGGCAATAGTGTCTGTACAGACCATTGATGCCCGACAACCTGAAATGAAACCTGGTTGGCCGCTACTACACCGGAAGATTTTATCAGAAACACAATTACCTGATAAACCATTCATGCGCCACCAGACCTCTGTGGTCCAGTGGGCAATGAAGTTGCCACGCAGAAATCTTTCCTATCGTGTTGATCATATTCAGGATCAATCTGTGGCTTTATATAGTGAAAGTGGTGCTCTTGTTCCAGTAGATTCGGAAATAGGGAAAACTTATTCGTCGCCTGCATGCAATTTAAAAATTATTCCTAAAGAATTAGAGGCACTTCATGAGAAATACTCATCAAAATGCAGATTGTTTGAGTACCAAGAACTTGTATCAGTGACATCAAATTTTTTGCCTGAAAACTTGATCGGTAAAGGAGGAAGTAGTATGGTTTATCGAGGCTGCCTCCGTGATGGCAAGGAACTTGCTGTCAAAATCCTAAAGCCTTCTTATGATGTTTTGAAAGAATTTCTTTTGGAAATAGAAATCATCACTACATTGCATCACAAAAACATTATTACACTCCTTGGTTTCTGCTTTGAGAATGGCAATCTTCTTCTGGTTTATGATTTCTTATCAAGAGGAAGCCTCGAAGAGAACATTCACGGGACTAAGAAAAACCCCGGCAAGTTTGGTTGGGCGCAGAGATATAAGGTTGCAACAGGTGTTGCTGAGGCTTTGGATTATCTGCATTGTAAAAATGATCAGCCTGTTATCCATCGAGATGTAAAATCATCAAATGTATTACTATCTGAAGATTTTGAACCTCAGCTTTCTGATTTTGGATTGGCTACGTGGGCGTCAACCACATCATCGTATATAACGTGCACGGATGTTGCTGGAACCTTTGGTTATATGGCTCCTGAATACTTCATGTACGGCAAAGTAAGTGATAAGATCGATGTCTATGCGTTCGGTGTCGTGCTGCTTGAGCTGCTTTCAGGGAGAAAGCCGATAAGTGCTGATTTTCCAAAAGGTCAACAGAATCTTGTTATGTGGGCAAGTCCGCTTCTAAATAGCGGAAAGGTATCAGAATTGTTAGATCCTACTTTAGGTGATAACTATGATCATGAGGAGATGGAAAGGATGGTCTTAGCAGCAACACTTTGCATCAAACATGCTCCAAAAGCTAGGCCTCAAATGAGCATTGTATCAAAGCTACTTCAAGGCGATATTGACGCGATCAAGTGGGCAAAAGTGGAAGTCAATACTTTGGAAGCGCACGAAATGCTCGATGACGAAGCATGTCCACCAAGTAATCTACAGTCACATCTTAATCTTGCACTGCTTGATGTGGAAGATGACTCACTCTCCATGTATAGTGTTGAACAAAGTGTATCACTAGAAGACTACTTGAGAGGCAGGTGGAGCCGATCATCGAGTTTTGACTGA 2211 0.4156 MQNNSPDGGSGCRTVVVGVKMDSPSKELLTWALVKVAQPGDLVVALHVLGTNEIVNGDGKSSLLSLVKSFDSVLNVYEGFCNLKQVDLKLKICRGSSVKKILVREANAYSATHVIVGSVHRHHRIRSSSSVAKYCARKLSKDCCILAVNNGKVVFQRDSLAASIPVADVQGLDRHHGNGLLGSIHWTLSKSTKVQNDDADEGTRRISDHSLAKVLLDSTENVKHHSCSICGALQDTSCHQSADEPSEGSERSSVDGGNENSMAIVSVQTIDARQPEMKPGWPLLHRKILSETQLPDKPFMRHQTSVVQWAMKLPRRNLSYRVDHIQDQSVALYSESGALVPVDSEIGKTYSSPACNLKIIPKELEALHEKYSSKCRLFEYQELVSVTSNFLPENLIGKGGSSMVYRGCLRDGKELAVKILKPSYDVLKEFLLEIEIITTLHHKNIITLLGFCFENGNLLLVYDFLSRGSLEENIHGTKKNPGKFGWAQRYKVATGVAEALDYLHCKNDQPVIHRDVKSSNVLLSEDFEPQLSDFGLATWASTTSSYITCTDVAGTFGYMAPEYFMYGKVSDKIDVYAFGVVLLELLSGRKPISADFPKGQQNLVMWASPLLNSGKVSELLDPTLGDNYDHEEMERMVLAATLCIKHAPKARPQMSIVSKLLQGDIDAIKWAKVEVNTLEAHEMLDDEACPPSNLQSHLNLALLDVEDDSLSMYSVEQSVSLEDYLRGRWSRSSSFD* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5452 736 SMART serkin_6 390 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5452 736 ProSiteProfiles Protein kinase domain profile. 390 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5452 736 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 147 - -
Tpr2g5452 736 Gene3D Phosphorylase Kinase; domain 1 356 464 - -
Tpr2g5452 736 MobiDBLite consensus disorder prediction 240 260 - -
Tpr2g5452 736 Pfam Protein kinase domain 394 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5452 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Tpr2g5452 736 CDD STKc_IRAK 396 663 - -
Tpr2g5452 736 SUPERFAMILY Protein kinase-like (PK-like) 371 664 IPR011009 -
Tpr2g5452 736 Gene3D HUPs 12 150 IPR014729 -
Tpr2g5452 736 Pfam Universal stress protein family 13 144 IPR006016 -
Tpr2g5452 736 Gene3D Transferase(Phosphotransferase) domain 1 465 678 - -
Tpr2g5452 736 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Tpr2g5452 736 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 730 - -
Tpr2g5452 736 PANTHER OS01G0253100 PROTEIN 8 730 IPR045271 GO:0004714|GO:0006468
Tpr2g5452 736 CDD USP_Like 14 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5452 Tpr-Chr2 61445397 61450037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5452 372 661 Trihelix Transcription Factor Family AT5G38560 44.816 3.88e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr2g5452 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5452 - - aprc:113846853 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5452 2 61445397 61450037 Tpr2g5452 2 61445397 61450037 ECH