Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5445 ATGCCACGCCATCGGTGCACAGTGTATTCCGAGAGCGATTACGACGACGACGACGACGACGATAACGTAACGATGAGGTGTCTTTCTTGCGAAGATGATTACGATCCCGATGACGCCGGTACCTGCAAAGAATGCTACGACGAAGCTAACGAGACCGAAGAAGAACTCAAACGTGAGATCCAAGACCTAAAATCTAAAGTCTCATTCCTCACTCTATCTTCTCCGCTTGATGCTCCTTCCACCACCGATCTTGTTCTTCTTCCATCTACCGATGCTTTCTCTCCTTCCATTCCCGCTCATAAGGCCGTTCTTGTTAGTCGCTCTCCAGTTTTCAGAGCCATGCTAGAGAATGATATGGAGGAAAGTCGGAGTGGCACCATCAAGATTGCTGATGTATCGTACGATTCTCTTCGTGCTTTTGTTAACTACTTATACACTGCTGAAGCATTCCTCGACAACCAAATGGCCTGCAACCTATTAGTTTTAGCAGAAAAGTATCAGGTGAAGCATCTTAAGGCATATTGTGAGAAGTATTTGATCTCCAAACTGAATTGGGAGAAAGCTATTGTGAACTTTGCCTTTGCACATCAACACAATGCCAACCAATTGCAAGATGCCGCCTTGGCAGTGATCATGGAGAATATGGACAACCTCACCAAAAATGAAGATTATACAGAGTTAGTGGACAGTAATCCTCGTCTTGTTGTGGAAATATATGAAGCATATCTTTCTAAACAGGTTAATACTGCAGCCACACTCGGGCAATAG 768 0.4453 MPRHRCTVYSESDYDDDDDDDNVTMRCLSCEDDYDPDDAGTCKECYDEANETEEELKREIQDLKSKVSFLTLSSPLDAPSTTDLVLLPSTDAFSPSIPAHKAVLVSRSPVFRAMLENDMEESRSGTIKIADVSYDSLRAFVNYLYTAEAFLDNQMACNLLVLAEKYQVKHLKAYCEKYLISKLNWEKAIVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYTELVDSNPRLVVEIYEAYLSKQVNTAATLGQ* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5445 255 Gene3D Potassium Channel Kv1.1; Chain A 49 183 IPR011333 -
Tpr2g5445 255 Gene3D - 184 253 - -
Tpr2g5445 255 PANTHER GH01369P 24 252 - -
Tpr2g5445 255 CDD BTB_POZ_ZBTB_KLHL-like 96 166 - -
Tpr2g5445 255 Coils Coil 42 73 - -
Tpr2g5445 255 ProSiteProfiles BTB domain profile. 82 153 IPR000210 GO:0005515
Tpr2g5445 255 Pfam BTB/POZ domain 78 182 IPR000210 GO:0005515
Tpr2g5445 255 PANTHER SPECKLE-TYPE POZ PROTEIN 24 252 - -
Tpr2g5445 255 SUPERFAMILY POZ domain 81 181 IPR011333 -
Tpr2g5445 255 SMART BTB_4 82 183 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5445 Tpr-Chr2 61394705 61397477 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr2g5445 BTB 8.2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5445 K10523 - gmx:100794118 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5445 2 61394705 61397477 Tpr2g5445 2 61394705 61397477 ECH