Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5444 ATGGGAATTGAGGAAGGAGCAAGCAGTTCTGGTAATACTGAATGTGCTGAAGGAGTTCAGTGTTTGAAACGTAAAGCTATTTCTGATGAGGTGCCGATTTCAAATGGAAATGGGGTTGTTGAAGAGGCTCGATGCTCGAAAAGTGAAGAGGTGAATGATGGGGCTGTAATTTCCAATGGGAATTGTGTTATTGAAGAGACTCGATGCTCAAAAAGTGAAGAGGTGAATGATGGGGCTGTATTTTCCAATGGAAATGGTGCTTCTGAGGAGGCTCGATGCTCGAAAAGTGAAGCTGTGAGTGATGGGGCTTTAATTTGCAATGGAAATTGTGTTTCTGAAGAGGCTCGGTGCTCGAAAAGTGAAGCTGTGAGTGATGGGGCTGTAATTTCCAATGGAAATTGTGTTTCTGAAGAGGTTCGACACTTGGAAAGTGAAGCCATGAGTGATGAGGGGCCAATTTCAAATGGAAATAGGGTTGTTGAAGAGGCACAACACTTGGAAAGTGAAGCCATGAGTAGTGATGAGGCTGTAATTTCTAATGGAAATGGTGTTGCTGAAGAGGCTCGGTGCTCGAAGAGTGACGTCGTGAATGATGGGACAGTGTTAATGAATGTAAATGGTGGTGCTGAAGTCAATGCGGTTTTGAAAAGTGATGGCTTGAATAATGGGGTGAATGTAAATGGTGTTACTGAAGAGGATGGAGGCTTGAAAAGTGAACCCATTAGCAATGGGGCAGCGATTTCAGATGGGTTTGATTCTGGTGATGGGGGATCTTGTGGAGTTACATGTCTTCGAACTTATAAGAGGCGAAAGTATGATAAGTCAAGTTCAAAAGGAAAAGCTCAGGAGGATCGCAAAAAATGCGTCGAAACTGCAAGTCATATAGCAGACCAGGTTGCAAAGGAACCCTTTGATGCAACTTTAGGCAATACAGCAGATGATTGTGACCATAGACATTGGGGAAATGTTGTACTGAAGCATTTACATCAGTCATTAGGCAGTGTCAATGGTGGCATAGGGGAAGCTAAAATTGATCGTTTATCTCATAGAACACGGACTGAAGCTAACGGGTATGCACCTGTCATGCAAAGTGGATCTTCTAGTGAATCCCATGGCCATGGTGGTACTGAGATGTGTCAGCGTATGCTATGCGAAGTATTAACCTCAGAGATGTTCAATTCATTATGCAAGACTATATTTGAAAACTTCCAAGGAATAAAGCCCGAAAGTGTAGTTGATTTTAGTGTCGTGATCTCAAGGATGCAGCAGAAATTTTATGAAAATTCACCTGAACTTTTTTTGTCAGATATTCAACAGGTCTGGAGAAAGCTTCAAAATACTAGTAACAAAATATTTGCACTTTCTAAGAGCCTGGTCGACTTGTCAACTACTTGCTACTCTGAGCTGGTTGGAATTTCAGCGCAGAGCACATCTGAAGATGAAAAGCAAGTGGAATCGGACGCTCACATGAAACCGGAGGAGATGGAAGAATGCGCTATCTATAAAATTTGCAGTTGCAGTTGTTGCAGAGAAAGGGTAGATGGCACAGACTGTTTGGTTTGTGATTCATGTGAGAAGGTGTACCATTTGTCCTGTATTGAGCCTGCAGTGAAAGAAATACCTCACAAAAGCTGGTATTGTGCTAATTGCACCACAAGTGGCATTGGATCTCCACACGAGAATTGTGTAGTCTGTACGAGGTTGAATGGCAAAAAGACTCCCAAGAAAATAATTGGTGATGAAAGCCTCCCTACAAATGAGGAAACATTTGATGAATTTGAAGAGAATTGCAGAAGCTATAATGGGATTAAATTATATATGGGAAAAAAACCCAATTGCAAAGTGTGTGGAAATGAATTCGTCAAAGGTGAAAAAATAAGAATATGTGGTCACCCTTATTGCCCAAGTCAATGTTACCATGTAAGGTGTTTGACAAGCAAACAAATAAATATATATAGTTTTCAGTGGTACTGCCCTTCTTGTTTATGCCAATCTTGCCTCACCAATCAAGATGATGATCGGATTGTCCTCTGTGATGGCTGCGATCATGGACATCACATCTATTGCATGAAACCTCCACTAGTTTCTATTCCACAAGGGAAATGGTTCTGCAGAAAATGTGATGCTGGAATCAAGGCAATATCCCAGGCAAAAAAGGCGTATGAGAGTAACAAGCTAAGAACTGGTGAATATATTTCTAAGACAAATGCTAATAACAAAAACAACTGCAGCAATATATGTGTAGAAGAATTGGAAAGTGTTGGAGGAATGGACATGCTTTTAACTGCAGCCAATTGTCTTAATTTCGAAGAGAATTTGTCCGAAACCTAG 2331 0.4114 MGIEEGASSSGNTECAEGVQCLKRKAISDEVPISNGNGVVEEARCSKSEEVNDGAVISNGNCVIEETRCSKSEEVNDGAVFSNGNGASEEARCSKSEAVSDGALICNGNCVSEEARCSKSEAVSDGAVISNGNCVSEEVRHLESEAMSDEGPISNGNRVVEEAQHLESEAMSSDEAVISNGNGVAEEARCSKSDVVNDGTVLMNVNGGAEVNAVLKSDGLNNGVNVNGVTEEDGGLKSEPISNGAAISDGFDSGDGGSCGVTCLRTYKRRKYDKSSSKGKAQEDRKKCVETASHIADQVAKEPFDATLGNTADDCDHRHWGNVVLKHLHQSLGSVNGGIGEAKIDRLSHRTRTEANGYAPVMQSGSSSESHGHGGTEMCQRMLCEVLTSEMFNSLCKTIFENFQGIKPESVVDFSVVISRMQQKFYENSPELFLSDIQQVWRKLQNTSNKIFALSKSLVDLSTTCYSELVGISAQSTSEDEKQVESDAHMKPEEMEECAIYKICSCSCCRERVDGTDCLVCDSCEKVYHLSCIEPAVKEIPHKSWYCANCTTSGIGSPHENCVVCTRLNGKKTPKKIIGDESLPTNEETFDEFEENCRSYNGIKLYMGKKPNCKVCGNEFVKGEKIRICGHPYCPSQCYHVRCLTSKQINIYSFQWYCPSCLCQSCLTNQDDDRIVLCDGCDHGHHIYCMKPPLVSIPQGKWFCRKCDAGIKAISQAKKAYESNKLRTGEYISKTNANNKNNCSNICVEELESVGGMDMLLTAANCLNFEENLSET* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5444 776 PANTHER HISTONE ACETYLTRANSFERASE 271 771 - -
Tpr2g5444 776 ProSiteProfiles Zinc finger PHD-type profile. 660 710 IPR019787 -
Tpr2g5444 776 SUPERFAMILY FYVE/PHD zinc finger 662 712 IPR011011 -
Tpr2g5444 776 SMART PHD_3 665 708 IPR001965 -
Tpr2g5444 776 SMART PHD_3 612 662 IPR001965 -
Tpr2g5444 776 SMART PHD_3 505 551 IPR001965 -
Tpr2g5444 776 ProSiteProfiles Zinc finger PHD-type profile. 503 553 IPR019787 -
Tpr2g5444 776 SUPERFAMILY FYVE/PHD zinc finger 488 551 IPR011011 -
Tpr2g5444 776 PANTHER D4, ISOFORM A 271 771 - -
Tpr2g5444 776 ProSitePatterns Zinc finger PHD-type signature. 658 707 IPR019786 -
Tpr2g5444 776 Gene3D - 411 553 - -
Tpr2g5444 776 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 606 717 IPR013083 -
Tpr2g5444 776 Pfam PHD-finger 663 708 IPR019787 -
Tpr2g5444 776 Pfam PHD-finger 506 552 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5444 Tpr-Chr2 61382148 61391912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5444 662 726 C2H2 Transcription Factor Family AT3G01460 44.615 7.99e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr2g5444 PHD 1.7e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5444 - - gmx:100795906 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5444 2 61382148 61391912 Tpr2g5444 2 61382148 61391912 ECH