Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5437 ATGCTTCCTTCTACACAGCAATATCGACATCAAAATAGTCTGCACTCCCCTTCACCATATCCACCCGAGATTCGACCTGAAAAAATAAGCAAAGCCATGGCTGTCCGCTTAAAACAGCTGCTGCTGATGGTGGCTGCTGCCATTTATACAAAAGCAGCAACTCAACCGATGTCACTACCAAACTGTCCAACAAAGTGTGGTTCTGTCACCATTCCCTTCCCATTTGGGACCACCGAGAATTGTTCCCTCGACAACACCTTTCTCATTAATTGCAATCAAACATCTTCAACTCCAACCTCAACAAACATACCTTTCTTGGAAAAGAGTAATCAAACTGTCCTAAATATCTCACTCAATGGTGAATTGCGCGTTGCATGGCCGGTAGCTAGTGATTGCTACGCAGAAAAGAGCAAACGTGTGAACCAAACAGTTAAGCATGTCAACATGACAAATTTTCAGATCTCACCAACTCGAAACAAGTTGACAGCAGTTGGCTGTGACACGATTGGAGCACTCTCAGCAAATGATTCTGGGGGAAACAACTACACCACAGGATGTGTGGCTTTGTGCAACAGGCTTGATGATATCGTGGCCAATCAATCTTGCTCAGGTACTGGTTGTTGCGAGATTTCAATACCCCAAGGTCATGTGTTAACAGAAATAGCCTATGGTTCTGGAGGCCTATTCAACAATCACTCATCAGTACATGACTTCAATCCATGTGGTTATGCTTTTGTGGTTGAAAATGGAGCCTACAGCTTCTCATCCACAGACCTTCCCAAGTTGAAAAAGAAGGAGTTTCCTGTGTTGTTAGACTGGGCAGTAGGGAACCAAACGTGCCAGCAAGCTCAGAAGGATCTTTTCAGTTATGCATGTAAGGCCGACAAAAGTACATGTTACGATTCAACCGAGAGATCTGGCTACCTTTGCAGATGCTTTCATGGATATTGGGGAAATCCATACCTCATTCACGGTTGTCAAGATATTAATGAATGCATGGAAGCCAATGACTGCGTTGAGGAGGCAACATGCATCAATCTTCTTGGAAGCTACCATTGTTTATGCCCGGCAGAATATGAGGGAGATGGGAAAAATAATGGAACAAGATGCAATAAAAAATCCAGTACCAAAGGAAGGAAAGAAATCATAATGATCATTGCACTGAGTGTCAGCATAAGTCTCGTAGGACTATTAGTCGGAAGCTTTTATGTGTATTGGGCATTGAAGAAAAGAAAGCTCGTTAAACTTAAAGAACAATTTTTTCAACAAAACGGTGGCTTACTGTTACAACAACAGATAGTGAGGCATAGAGGGTCAACTGAAACAACTAAAGTGTTCACTGTTGAGGAGCTAAATGAAGCAACAGACAACTTCAACGAAGACAGGATCCTAGGCCAAGGAGGTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCAATAAAGAAGTCAAAAATAAGTGACCCAAACCAGATTGAGCCGTTCATCAATGAAGTGATTGTGCTTTCACAAATAAACCATAGAAATGTGGTAAAGCTTTTGGGTTGTTGTTTAGAGACAGAAATTCCCTTGCTTGTTTATGAATTCATTCCCAATGGTACTGTTTATGAGCATCTTCATGACCAAAACCAATCTTTAAAGCTAACATGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCTTGGCATACTTGCATTCTGCTGCTTCTACACCAATAATACATAGAGATGTGAAATCTACAAATATACTACTAGACAGCAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCGAGGATCATTCCTCTTGATCAAACTCAGATAACCACTTTAGTGCAAGGGACATTGGGGTATCTTGACCCAGAATACTTCCACACAAGCCAATTAACAGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTCCTAGCAGAGCTACTGACAGGAAAGAAGGCACTATCTTTTGGCAGGCCAGAGGTTGACAGAAACCTTGCAGTGTACTTTGTTTCTTCATTGAAAGAGGGCCGATTACTTCAAATTTTGGACAGAAATATAGATGAGGAAAATATTGAGCAATTAAAGGAAGTTTCCCACATCGCAGAAGAGTGTTTGAGGGTGAAGGGTGAGGAAAGACCCACCATGAAAGAAGTGGCAATGGGACTAGAGGGAATATTAGTTATTGAACAGCACCGTTGGGGAAGTGACAATTTGTCTTCAGAAGAGACTGAAAACTTGCTCAAAACAGCGCCGTCCATTATCAATGTTGAAGATGGTGTGGGCGGAAGTGGAATTAATTCTTCCGACTCATATAGCATAAACCAAATTTCAATTTCTTTGAATGGTGGAAGATGA 2370 0.4148 MLPSTQQYRHQNSLHSPSPYPPEIRPEKISKAMAVRLKQLLLMVAAAIYTKAATQPMSLPNCPTKCGSVTIPFPFGTTENCSLDNTFLINCNQTSSTPTSTNIPFLEKSNQTVLNISLNGELRVAWPVASDCYAEKSKRVNQTVKHVNMTNFQISPTRNKLTAVGCDTIGALSANDSGGNNYTTGCVALCNRLDDIVANQSCSGTGCCEISIPQGHVLTEIAYGSGGLFNNHSSVHDFNPCGYAFVVENGAYSFSSTDLPKLKKKEFPVLLDWAVGNQTCQQAQKDLFSYACKADKSTCYDSTERSGYLCRCFHGYWGNPYLIHGCQDINECMEANDCVEEATCINLLGSYHCLCPAEYEGDGKNNGTRCNKKSSTKGRKEIIMIIALSVSISLVGLLVGSFYVYWALKKRKLVKLKEQFFQQNGGLLLQQQIVRHRGSTETTKVFTVEELNEATDNFNEDRILGQGGQGTVYKGVLQDKRIVAIKKSKISDPNQIEPFINEVIVLSQINHRNVVKLLGCCLETEIPLLVYEFIPNGTVYEHLHDQNQSLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDSNLTAKVSDFGASRIIPLDQTQITTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFGRPEVDRNLAVYFVSSLKEGRLLQILDRNIDEENIEQLKEVSHIAEECLRVKGEERPTMKEVAMGLEGILVIEQHRWGSDNLSSEETENLLKTAPSIINVEDGVGGSGINSSDSYSINQISISLNGGR* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5437 789 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 43 766 IPR045274 GO:0007166
Tpr2g5437 789 Pfam Wall-associated receptor kinase galacturonan-binding 62 124 IPR025287 GO:0030247
Tpr2g5437 789 SUPERFAMILY Protein kinase-like (PK-like) 440 725 IPR011009 -
Tpr2g5437 789 ProSiteProfiles EGF-like domain profile. 328 371 IPR000742 -
Tpr2g5437 789 MobiDBLite consensus disorder prediction 1 22 - -
Tpr2g5437 789 SUPERFAMILY EGF/Laminin 327 364 - -
Tpr2g5437 789 CDD STKc_IRAK 464 730 - -
Tpr2g5437 789 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 43 766 - -
Tpr2g5437 789 ProSitePatterns Calcium-binding EGF-like domain signature. 328 353 IPR018097 GO:0005509
Tpr2g5437 789 CDD EGF_CA 328 362 - -
Tpr2g5437 789 MobiDBLite consensus disorder prediction 1 18 - -
Tpr2g5437 789 Gene3D Phosphorylase Kinase; domain 1 432 533 - -
Tpr2g5437 789 Pfam Protein kinase domain 458 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5437 789 Gene3D Laminin 277 370 - -
Tpr2g5437 789 Gene3D Transferase(Phosphotransferase) domain 1 534 748 - -
Tpr2g5437 789 Pfam Calcium-binding EGF domain 328 370 IPR001881 GO:0005509
Tpr2g5437 789 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 344 355 IPR000152 -
Tpr2g5437 789 SMART serkin_6 458 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5437 789 SMART egf_5 279 327 IPR000742 -
Tpr2g5437 789 SMART egf_5 331 371 IPR000742 -
Tpr2g5437 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Tpr2g5437 789 SMART egfca_6 328 371 IPR001881 GO:0005509
Tpr2g5437 789 ProSiteProfiles Protein kinase domain profile. 458 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5437 Tpr-Chr2 61293232 61298400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5437 31 752 Receptor kinase-like Gene Family AT1G21230 48.361 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g5437 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5437 - - mtr:MTR_3g088780 1083.17