Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5435 ATGGCTGCTTACATGAAACAGCTTCTACTGATTGCTGTTGTTGCTGTTCTTTATACAAAAGCATCAACTCAACCGATGTCACTACCAAACTGCCCATCAAAGTGTGGTTCTGTTACCATTCCCTACCCATTTGGAACCACCAAAGATTGTTCCCTAGACAACACCTTTCTCATTGATTGCAACCAAACATCTTCAACCTCATACGCACCATTCTTGCCACAGAGTAATCAAAGTGTTCTAAACATTGCACTCGATGGTGAACTGCGTGTTTCATGGCCAATAGCCAGTGATTGCTACGCTGAAAAGGGTGAATTTGCAAATGAAACAGCTCAGGGTATCAGCATGACAAATTTTCATATTTCACCAACTGGAAACAAGTTGATAGCAGTTGGTTGTGACACGATGGGATTATTCTTAGCAAATGATTCCAGGGGAAACAACTATACCACAGGATGTGTGGCTTTATGCAACAGCCGTAATGATATTGTGGACAATCAATCTTGTTCTGGTACTGGTTGTTGCGAGATTTCAATACCTCAAGGTCATGTGCTTACAGAAGCATTCTATATTTCTGGCAGCTTATTGAACAATCACTCATCAGTACATGACTTCAATCCATGTGGTTATGCGTTTTTGGTTGAAAACGGAAACTACAACTTTTCATTCACAGACCTCATGAGTTTGAAGAAGGAGTTTCCTGTGTTGTTGGATTGGGCAGTGGGGAACCAAACATGCCAGCAGTCAAGTTATGCATGTAATGCAAACAGTACATGTTACGATGTACGAACTGACAAATCTGATGGTGGTTACCGTTGTAGATGCTTTGACGGATATCGGGGAAATCCATACCTTCATCAAGACGGTTGTCAAGATATTGATGAATGCATGGAGACGAATGACTGTGTTGAGGGGGCAACATGCAAAAATCTTCTTGGACGTTACAATTGTTCATGCCCGACAGGATTTGAGGGAGACGGGAAAAAAAGCGGAATAGGATGCAGTAAAAAATTGAGCAGCAAACGAAGGAAAGAGATCATATTGGTCATCGCATTGAGTGTCAGCTTAAGCCTCGTAGCACTACTGGTTGGAAGTTTTTATGCATATTTTGCATTGAAGAAAAGAAAGCTCGTTAAACTTAAAGAACAATTTTTTCAACAAAACGGTGGCTTACTGTTACAACAACAGATAGGGAGGCATGGAGGATCAACTGAAACAGCTAAAGTCTTCACTCTTGAGGAGCTAAAAGAAGCTACCAACAACTTTGATGAAGGAAAGATCCTAGGACAAGGAGGTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCGATAAAAAAATCCAAAATCAATGACCCAGACCAGATTGAACCGTTCATCAATGAAGTGGTCATTCTTTCCCAAATCAACCATAGAAATGTGGTAAAGCTTTTTGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTTGTTTATGAATTTATTCCCAATGGCACTGTTCATGAGCATTTACATGATAAAAACCAATCTATAAAACTAACATGGAAAACAAGATTAAGAATAGCAAAAGAAACAGCTGGTGTCCTGTCATACTTACATTCTGCCGCTTCTACACCTATCATACATAGAGATGTGAAATCTACAAATATACTCCTCGATCGCAATCTTATTGCAAAGGTTTCCGACTTTGGAGCTTCAAGGATTGTTCCTCTTGATCATAGTCAGATAAACACTCTAGTGCAGGGGACATTGGGGTATCTTGACCCAGAATACCTCCACACAAGCCAGTTAACAGAGAAGAGTGATGTTTATAGTTTTGGAGTTGTCCTAGCAGAGTTGCTGACAGGAAAGAAGGCACTATCTTTTGACAGGCCAGAGGTTGAAAGAAACCTTGCTTCATACTTTGGTTCTTCAATGAAAGAGGGTCGGTTACTTCATATTTTGGACCAAAATATAGATGAAGCAAATATTGAGCAAGTAAAAGAGGTTGCCCATATTGCAGAACGATGTTTAAGGTTGAAGGGGGAGGATAGACCCACTATGAAAGAAGTAGCAATGGAATTAGAAGGAATATTAGTTATTGAAGAGCATCGTTGGGGAAGTGACAATTTGTTTTCAGAAGAGACTGAAAACTTGCTCAAAACAACAGGATCCGTTAAAAATGTTGAAGATGGCATCGGTGGAAGTGGCATTATTAATTCTTCTGATTCATATAGCTTAAACCAGATCTCAATCTCGATTGGTGGAAGATGA 2259 0.3984 MAAYMKQLLLIAVVAVLYTKASTQPMSLPNCPSKCGSVTIPYPFGTTKDCSLDNTFLIDCNQTSSTSYAPFLPQSNQSVLNIALDGELRVSWPIASDCYAEKGEFANETAQGISMTNFHISPTGNKLIAVGCDTMGLFLANDSRGNNYTTGCVALCNSRNDIVDNQSCSGTGCCEISIPQGHVLTEAFYISGSLLNNHSSVHDFNPCGYAFLVENGNYNFSFTDLMSLKKEFPVLLDWAVGNQTCQQSSYACNANSTCYDVRTDKSDGGYRCRCFDGYRGNPYLHQDGCQDIDECMETNDCVEGATCKNLLGRYNCSCPTGFEGDGKKSGIGCSKKLSSKRRKEIILVIALSVSLSLVALLVGSFYAYFALKKRKLVKLKEQFFQQNGGLLLQQQIGRHGGSTETAKVFTLEELKEATNNFDEGKILGQGGQGTVYKGVLQDKRIVAIKKSKINDPDQIEPFINEVVILSQINHRNVVKLFGCCLETEVPLLVYEFIPNGTVHEHLHDKNQSIKLTWKTRLRIAKETAGVLSYLHSAASTPIIHRDVKSTNILLDRNLIAKVSDFGASRIVPLDHSQINTLVQGTLGYLDPEYLHTSQLTEKSDVYSFGVVLAELLTGKKALSFDRPEVERNLASYFGSSMKEGRLLHILDQNIDEANIEQVKEVAHIAERCLRLKGEDRPTMKEVAMELEGILVIEEHRWGSDNLFSEETENLLKTTGSVKNVEDGIGGSGIINSSDSYSLNQISISIGGR* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5435 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Tpr2g5435 752 Pfam Wall-associated receptor kinase galacturonan-binding 31 86 IPR025287 GO:0030247
Tpr2g5435 752 SMART egfca_6 291 334 IPR001881 GO:0005509
Tpr2g5435 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 715 IPR045274 GO:0007166
Tpr2g5435 752 ProSitePatterns Calcium-binding EGF-like domain signature. 291 316 IPR018097 GO:0005509
Tpr2g5435 752 SUPERFAMILY EGF/Laminin 290 327 - -
Tpr2g5435 752 Pfam Calcium-binding EGF domain 291 325 IPR001881 GO:0005509
Tpr2g5435 752 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5435 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 715 - -
Tpr2g5435 752 SMART egf_5 244 290 IPR000742 -
Tpr2g5435 752 SMART egf_5 294 334 IPR000742 -
Tpr2g5435 752 CDD STKc_IRAK 427 693 - -
Tpr2g5435 752 Gene3D Laminin 242 331 - -
Tpr2g5435 752 SUPERFAMILY Protein kinase-like (PK-like) 405 690 IPR011009 -
Tpr2g5435 752 ProSiteProfiles Protein kinase domain profile. 421 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5435 752 CDD EGF_CA 291 325 - -
Tpr2g5435 752 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Tpr2g5435 752 ProSiteProfiles EGF-like domain profile. 291 325 IPR000742 -
Tpr2g5435 752 Pfam Protein kinase domain 422 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5435 752 Gene3D Transferase(Phosphotransferase) domain 1 497 708 - -
Tpr2g5435 752 Gene3D Phosphorylase Kinase; domain 1 397 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5435 Tpr-Chr2 61266657 61287642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5435 8 715 Receptor kinase-like Gene Family AT1G21230 46.944 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g5435 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5435 - - mtr:MTR_3g088780 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5435 2 61266657 61287642 Tpr2g5435 2 61266657 61287642 ECH