Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5433 ATGACTCTGCACATAAAACAGTTTCTACTGATTGCGGTTGTTGCTGTTCTTTATACAAAAGCATCAACTCAACCAATGTCACTACCAAACTGCCCATCAAAGTGTGGTTCTGTCACCATTCCCTACCCATTTGGAACCACCAAAGATTGTTCCCTAGACAACACCTTTCTCATCAATTGCAGCCAAACATCACTCCTACCATTCTTCCAAGCAAATAATTCTGTTTATAATTATAATATAAGTGTTCTAAACATCTCATTGAATGGTGAGCTGCGTGTTGCATGGCCAATAGCCAGTGATTGCTACAATGAAAAGGGTAAACCCGAGAACGAAATAAATCAAGAAATCAGCCTGACATATTTTCACATCTCGCCAACTCGAAACAAGTTTATAGCAGTTGGTTGTGACATATTCGGAGCATTGGACGCGTTTGATTCTTGGGGAAACCACTATGCCACAGGATGTGTGGCTTACTGCAACAAGCCTAATGATACAGAGGCCAATCAATCTTGTTCAGGCATTGGCTGTTGCGAGATTTCAATACCCCAAGGTCATCATCAGTTGTTAACAAAAGTAGTATATATTGCTAATACCATACTTGACAATAATCACTCATCAGTACATGACTTCAATCCTTGTGGTTATGCTTTTTTGGTTGAAAAGGGATACTACAGCTTTAAACCCACAGACCTCAGTTTGAAGAAGAAGGAGTTTCCTGTGGTGTTGAATTGGGCACTGGGGAACCAAACATGCCAGCAGTCTAAGAAGAATCATTCAAGTTATGCATGTAATGCAAACAGTACATGTCACAATGTAGGAAAATCTGATGGTGGTTACATTTGTAGATGCTTTAACGGATATCGGGGAAATCCATACCTCCATCATGATGGTTGTCAAGATATTAATGAATGCATGGAGCCAAATGACTGTGTTAAGAAGGCAACATGTGTCAATCTTCTTGGAAGCTACCAGTGTTTATGCCCGGCAGGATCTGAGGGAGACGGGAAAAAGAAAGGAACAAGATGCACTAAAAAATTGAGTACCAAACAAAGGAAAGATATCATATTGATCATCGCATTGAGTGTCAGCTTAAGCCTCGTAGCACTACTGGTTGGAAGTTTTTATGCTTATTTTGCATTGAAGAAAAGAAAGCTCATTAAACTTAAAGAACAATTTTTTCAACAAAACGGTGGCTTACTGTTACAACAACAGATAGGCAGGCATGGAGGATCAACTGAAACAGCTAAAGTCTTCACTCTTGGGGAGCTAAATGAAGCTACCAACAACTTTGATGAAGGAAAGATCCTAGGACAAGGAGGTCAGGGAACAGTTTACAAAGGAGTATTACAAGATAAAAGAATTGTAGCAATAAAAAAATCCAAAATCAATGACCCAGACCAGATTGAACCGTTCATCAATGAAGTGGTCATTCTTTCCCAAATCAACCATAGAAATGTGGTAAAGCTTTTTGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTTGTTTATGAATTCATTCCCAATGGCACTGTTCATAAACATTTGCATGATAAAAACCAATCTATAAAACTAACATGGAAAACAAGATTAAGAATAGCAAAAGAAACCGCTGGTGTCCTGGCATACTTACATTCCGCCGCTTCTACACCTATCATACATAGAGACGTGAAATCTACAAATATACTCCTAGATAGCAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATTGTACCTCTTGATCATAGTCAGATAAACACTCTAGTGCAGGGAACATTGGGGTATCTTGATCCAGAATACCTCCTCACAAGCCAGTTAACAGAGAAGAGTGACGTTTATAGTTTTGGGGTTGTCCTAGCAGAGCTACTAACAGGAATGAAGGCATTATCTTCTGATAGGCTGGAGGTTGATAGAAACCTTGCTGCATACTTTGGTTCTTCGATGAAAGCGGGTCGGTTACTTCATATTTTGGACAAAAGTATAGACATGGAAAATATTGAGCAACTAAAAGAGGTTGCCCAAATTGCAGAACGATGTTTAAGGGTGAAAGGTGAGGACAGACCCACCATGAAAGAAGTGGCAATGGAACTAGAGGGAATATTAGTTATTGAAGAGCATCGTATGGGAAGTGACAATTTGTCATCAGAAGAGACTGAGAACTTGCTCAAAAATGTTGAAGATGGCATTAGTGGAAGTGGCATTAATTCTTCTGATCCGTATAGCTTAAACCAGATGTCAATGTCAACGTTTGGCGGAAGATGA 2268 0.3955 MTLHIKQFLLIAVVAVLYTKASTQPMSLPNCPSKCGSVTIPYPFGTTKDCSLDNTFLINCSQTSLLPFFQANNSVYNYNISVLNISLNGELRVAWPIASDCYNEKGKPENEINQEISLTYFHISPTRNKFIAVGCDIFGALDAFDSWGNHYATGCVAYCNKPNDTEANQSCSGIGCCEISIPQGHHQLLTKVVYIANTILDNNHSSVHDFNPCGYAFLVEKGYYSFKPTDLSLKKKEFPVVLNWALGNQTCQQSKKNHSSYACNANSTCHNVGKSDGGYICRCFNGYRGNPYLHHDGCQDINECMEPNDCVKKATCVNLLGSYQCLCPAGSEGDGKKKGTRCTKKLSTKQRKDIILIIALSVSLSLVALLVGSFYAYFALKKRKLIKLKEQFFQQNGGLLLQQQIGRHGGSTETAKVFTLGELNEATNNFDEGKILGQGGQGTVYKGVLQDKRIVAIKKSKINDPDQIEPFINEVVILSQINHRNVVKLFGCCLETEVPLLVYEFIPNGTVHKHLHDKNQSIKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDSNLTAKVSDFGASRIVPLDHSQINTLVQGTLGYLDPEYLLTSQLTEKSDVYSFGVVLAELLTGMKALSSDRLEVDRNLAAYFGSSMKAGRLLHILDKSIDMENIEQLKEVAQIAERCLRVKGEDRPTMKEVAMELEGILVIEEHRMGSDNLSSEETENLLKNVEDGISGSGINSSDPYSLNQMSMSTFGGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5433 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 734 IPR045274 GO:0007166
Tpr2g5433 755 Pfam Protein kinase domain 431 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5433 755 Gene3D Laminin 247 337 - -
Tpr2g5433 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Tpr2g5433 755 ProSiteProfiles Protein kinase domain profile. 430 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5433 755 SMART egfca_6 300 343 IPR001881 GO:0005509
Tpr2g5433 755 SUPERFAMILY EGF/Laminin 299 336 - -
Tpr2g5433 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Tpr2g5433 755 CDD STKc_IRAK 436 702 - -
Tpr2g5433 755 SMART egf_5 250 299 IPR000742 -
Tpr2g5433 755 SMART egf_5 303 343 IPR000742 -
Tpr2g5433 755 ProSiteProfiles EGF-like domain profile. 300 343 IPR000742 -
Tpr2g5433 755 SUPERFAMILY Protein kinase-like (PK-like) 414 699 IPR011009 -
Tpr2g5433 755 CDD EGF 263 292 - -
Tpr2g5433 755 Gene3D Phosphorylase Kinase; domain 1 400 505 - -
Tpr2g5433 755 SMART serkin_6 430 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5433 755 Gene3D Transferase(Phosphotransferase) domain 1 506 724 - -
Tpr2g5433 755 Pfam Calcium-binding EGF domain 300 342 IPR001881 GO:0005509
Tpr2g5433 755 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Tpr2g5433 755 CDD EGF_CA 300 334 - -
Tpr2g5433 755 Pfam Wall-associated kinase 168 271 IPR013695 GO:0004674|GO:0016021
Tpr2g5433 755 ProSitePatterns Calcium-binding EGF-like domain signature. 300 325 IPR018097 GO:0005509
Tpr2g5433 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 13 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5433 Tpr-Chr2 61255184 61258179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5433 8 724 Receptor kinase-like Gene Family AT1G21230 45.604 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g5433 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5433 - - mtr:MTR_3g088780 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5433 2 61255184 61258179 Tpr2g5433 2 61255184 61258179 ECH