Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5415 ATGTCTCAGAGAAGAGGCAGTGCATCTATGAACATGGCCACTGTGATAATTTCACTGCTCTGCCTTTTGGTTCTGGCTCAAAGTGCTAATGCTGCAACCTACACTGTTGGAGGACCTGGTGGATGGACCTATAACACTGATACTTGGCCTAATGGAAAAAAGTTTAGAGCTGGTGATGTGCTAATCTTTAACTATGATTCAACGACACACAACGTGGTTGCGGTCGATAAAAGCGGACACAACAGCTGCAAGGCGACGGGAGGTGCTAAAGTGTTCAGTTCAGGGAAAGACCAAATCAGGCTAGCAAGAGGGCAGAACTACTTCATATGCAGCATTCCTGGTCACTGCCAATCTGGGATGAAGGTTTCCATCATTGCAGTCTAG 384 0.4661 MSQRRGSASMNMATVIISLLCLLVLAQSANAATYTVGGPGGWTYNTDTWPNGKKFRAGDVLIFNYDSTTHNVVAVDKSGHNSCKATGGAKVFSSGKDQIRLARGQNYFICSIPGHCQSGMKVSIIAV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5415 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Tpr2g5415 127 PANTHER BASIC BLUE-LIKE PROTEIN 7 125 - -
Tpr2g5415 127 CDD Plantacyanin 32 126 IPR041844 -
Tpr2g5415 127 Gene3D - 32 126 IPR008972 -
Tpr2g5415 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Tpr2g5415 127 PANTHER BLUE COPPER PROTEIN 7 125 IPR039391 GO:0009055
Tpr2g5415 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Tpr2g5415 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5415 Tpr-Chr2 61012912 61014111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5415 1 127 Phytocyanin Superfamily AT1G17800 38.686 4.66e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5415 - - gmx:100788635 214.542