Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5411 ATGTATATGGCAGATACTTACTCCGGACAGAGTTACGAAAAGTACTTCCACGACTCACAAACCGAAGAACTGATAGAACCGTCTAGTTCCAACATCTCTACAAGTTCAATTCATCCAGATAGTGCTTCTTCTTACCAGCTAATAGGTAGTTCAGGAGCTTCATTGGTTGCTTCTTCTGATTTCGTAACAGATTTGATTATGGAAAATCCAAGCGTGGTTTCAATTGAAGTTGATGGTGTAATGAGATCAAAACTAGAAGCATTGGAGAGGGCATTACTTGATGATAGTGACATTGAGGTGGAAGAGGAATATGCGAATTTTCAAAGCATGGAAATTGATCCTAACATTATCGATTGGGCTGATCCTGATCCAATTCAGAATATGCTTCTCCGTGACTCGCCAAAGGAGTATTCATCTTCAGATTCCAATATTAGCAGCATCAGCAGAGAAATACCAAAAATTTCTAGGACCCCTAAGCAATTACTATATGAATGTGCTACCGCAATTTCAGAAGGAAATGAAGAGGGAGCATCGTTGATGATAAACGTTCTCCGGCAGATGGTCACAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTGGAGGGGCTTGCAGCTCGCCTTGCTGAATCCGGAAAAAGTATTTATAGAGCTCTAAAATGTAAGGAACCTCCTTCTTTGGACCGTTTAGCAGCGATGCAGATACTTTTTGAGGTCTGTCCGTGTTTTAAATTCGGGTTTATTGCTGCTAACAATGCAATTTCCGAAGCAGTTAAAGATGAAATGATGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTATATGAATCTTATTCAAACACTTGCTTCGAGGTCTATTAAGCCATCCCATGTTAGATTGACTGGCATTGATGATTCTGAGTCCGTGCAGCGATCCCTTGGAGGACTAAAGATCATAGGACAAAGACTTGAACAACTAGCACAAACAGTTGGTTTGTCATTTGAATTTCGAGCAGTCGCATCAAGGACTTCAATTGTCACATCATCGATGCTTAATTGTCGTCATGGAGAAGCTCTTGTGGTGAACTTTGCATTCCAGCTTCATCATATGCCTGATGAGAGTGTTTCAACAGTAAACGAACGAGACCAACTTCTTCGTTTGGTAAAGGGTTTGAATCCGAAGCTTGTAACAGTCGTGGAGCAAGATGTAAACACCAATACTACTCCTTTCTTGCAAAGATTTGTTGAAGCTTACAATTACTATTCGGCTGTGTTTGAGTCGCTTGATGTTACTCTTCCTAGAGAGAGTCAGGATAGAATGAATGTTGAGAGGCAATGCTTAGCGAGGGACATTGTTAATACAGTTGCGTGTGAAGGCGAGGATCGGATAGAACGGTACGAAGTCGCAGGAAAATGGAGAGCTAGGATGACAATGGCTGGCTTCATTTCATCTCCAATGAGTACTAACGCAAGCGATGAAATACGAAAACTCGTTAAGGCGTATTGTGATAGGTACAAGATAAAGGAGGAAAAGGGTGCACTTCATTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAGATGA 1587 0.4096 MYMADTYSGQSYEKYFHDSQTEELIEPSSSNISTSSIHPDSASSYQLIGSSGASLVASSDFVTDLIMENPSVVSIEVDGVMRSKLEALERALLDDSDIEVEEEYANFQSMEIDPNIIDWADPDPIQNMLLRDSPKEYSSSDSNISSISREIPKISRTPKQLLYECATAISEGNEEGASLMINVLRQMVTIQGEPSQRIAAYMVEGLAARLAESGKSIYRALKCKEPPSLDRLAAMQILFEVCPCFKFGFIAANNAISEAVKDEMMIHIIDFDINQGSQYMNLIQTLASRSIKPSHVRLTGIDDSESVQRSLGGLKIIGQRLEQLAQTVGLSFEFRAVASRTSIVTSSMLNCRHGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKGLNPKLVTVVEQDVNTNTTPFLQRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNTVACEGEDRIERYEVAGKWRARMTMAGFISSPMSTNASDEIRKLVKAYCDRYKIKEEKGALHFGWEDKNLIVASAWR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5411 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 527 IPR005202 -
Tpr2g5411 528 ProSiteProfiles GRAS family profile. 149 528 IPR005202 -
Tpr2g5411 528 Pfam GRAS domain family 159 528 IPR005202 -
Tpr2g5411 528 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 527 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5411 Tpr-Chr2 60945948 60949138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5411 5 528 GRAS Transcription Factor Family AT1G21450 60.813 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g5411 GRAS 6e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5411 - - cam:101513397 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5411 2 60945948 60949138 Tpr2g5411 2 60945948 60949138 ECH