Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5409 ATGGTACCTCCGGGTCCAGGGCCACCAACTCCCATTGGCGGTGCTCATTCTCTCTCACCTTCTCTAATGAGAACAAATTCAGGAATGTTAGGAGCTCAAGGGGCTCTCATGTCTTCGCAGACATCTTACCCTTCGCTCATGTCTCCTCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATGCTGAATCAATCATTTTCAAATGGAGTTCCAAGTCATCTCACTGGTCAAGGAAGTAGCCAGCGTGGAGGAATTGAAACTGGAGCTGAAACAGGCCAACTTTCCAGTGCTGGAAATGGGACAAGCTTCAATAATTCTCCATCCTCATTTATGCAATCAAATATGGCGAATGTAGGTTACTCTGGTCAAATTCAGGGTCAGCAATTTTCGAACCCTTCTAGCAACCAACTATTGCCAGATCATCAACATTCTCAACAGCTTGATCCTCAAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTCCTCTGAATACACAGCAGCAGCAACATTTTCAATCAATGCGAGGAGGAATAGGTGGAATGGGACCAGTGAAGTTAGAGCCCCAGGCAAACAATGACCAACATGTACAGCATCAGCTGCAATCAATGAGGAATCTTCCTCCAGTGAAATTGGATCAACAACAAATTCAAACAATGAGAACTCTTGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAACCGTTATTTTTGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGTTCCTTCACATGTCGAGACAATCTTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTACAGTTACAACAACACCAGCAGCAACAACTCTTAAAGGCAATGCCTCAGCAACGATCTCAATTACCACAACAATTTCAACAGCAGAATATGCCTACGCGGTCTCCTGTGAAACCCACATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTATCAGCAACAACATAGACCCGAGGATAACAACATCGAGTTTTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCCAATGCGAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAGATAAAGTACGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGACTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCCCGTCGGCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAACGGTTGCTCAGAAATACCAGTCTTTAACTCAAAATACAACACCGAATATATCTGCTCCAGAGTTACAAAACAATTGCAATATGTTTGTTACGTCAGCCCGTCAATTGGCTAAAACCCTCGAAGTTCCATTAGTTAATGATTTAGGATATACTAAGAGATATGTGCGCTGCCTACAGATATCAGAGGTGGTAAATAGCATGAAAGACTTGATAGATCACAGTAGAGAAACAGGGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAGTTAATTCGTGTGGAGTTCGAAATCAAACTCAACAGCATGAAGATCAATTAAAACAACAACAGCAACAACAAATGGTGGTACATAACTCAAATGGAGATCAAAACCCAGTGCAAGCTGCTGCCGTGCAAATTGGTTCCGGCAACGGTATGGTTAGTGTAAATAGTTCTGTCAACTCAGGGTCTGCATCAACAACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCCGTGAATTCTAGACAAAATTCAATGAACAATGCAAACAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTACCGTGCCACAGGTCCAGCCAAGCTCATCACCTTTTCAGTCACCGCCTACACCATCCTCATCTAATAACCCCCCACCAACACCTCATTCTACTTTAACGCCTCCCAATCAAATAAATACAACAAATTCAACAGCTAATATTTCCTTGCAACAACAACATCAATATCAACCATCTCTTTCTGGTGATGCTGACCCAAGTGATGCTCAAAACTCGGTCAAAAAAATCATACATGAGATGATGATGGCCTCCCAGATGAATGGCACAGGTGGAATGACAGGTGTTGGTTCTCTAGGAAATGATTTGAAGAATGTAAATGGCATTCTGCCAATGAGTGCAAATACAGGGCTCAACAATAGTAATGGCACACTTCACAATAATACAGGTGTTGGTAGTTATGGAACAATGGGGTTCGGTCAATCCACTATGCCTAATGGAATCAGAGCTTCTATGGTAAACCATTCAATCATGAATGGAAGGGGAGGAATGTCATCTATTGCTCGGGATCAAGCTATGAATCATCAATCGGATCTTTCAAATCAACTACTTAGTGGTCTAGGAGCAGTAAACGGTTTTAGTAATCTTCAATTTGATTGA 2694 0.4298 MVPPGPGPPTPIGGAHSLSPSLMRTNSGMLGAQGALMSSQTSYPSLMSPRTQFNNMNILGNMSNITSMLNQSFSNGVPSHLTGQGSSQRGGIETGAETGQLSSAGNGTSFNNSPSSFMQSNMANVGYSGQIQGQQFSNPSSNQLLPDHQHSQQLDPQNFQHSQQSMQQFSPLNTQQQQHFQSMRGGIGGMGPVKLEPQANNDQHVQHQLQSMRNLPPVKLDQQQIQTMRTLAPVKMEPQHCDQPLFLQQQQQQQQQQQQQFLHMSRQSSQAAAAQINLLNHHRLLQLQQHQQQQLLKAMPQQRSQLPQQFQQQNMPTRSPVKPTYEPGMCARRLTYYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGTVAQKYQSLTQNTTPNISAPELQNNCNMFVTSARQLAKTLEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDHSRETGTGPMESLAKFPRRTVNSCGVRNQTQQHEDQLKQQQQQQMVVHNSNGDQNPVQAAAVQIGSGNGMVSVNSSVNSGSASTTTSTIVGLLHQNSVNSRQNSMNNANSPYGGSSVQIPSPGSSSTVPQVQPSSSPFQSPPTPSSSNNPPPTPHSTLTPPNQINTTNSTANISLQQQHQYQPSLSGDADPSDAQNSVKKIIHEMMMASQMNGTGGMTGVGSLGNDLKNVNGILPMSANTGLNNSNGTLHNNTGVGSYGTMGFGQSTMPNGIRASMVNHSIMNGRGGMSSIARDQAMNHQSDLSNQLLSGLGAVNGFSNLQFD* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5409 897 PANTHER LIM DOMAIN-BINDING PROTEIN 1 897 IPR029005 -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 709 731 - -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 686 731 - -
Tpr2g5409 897 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 897 - -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 750 767 - -
Tpr2g5409 897 Pfam LIM-domain binding protein 333 587 IPR029005 -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 600 621 - -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 147 180 - -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 686 708 - -
Tpr2g5409 897 MobiDBLite consensus disorder prediction 750 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5409 Tpr-Chr2 60934823 60941907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5409 8 897 C2H2 Transcription Factor Family AT1G43850 56.176 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5409 - - gmx:100787573 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5409 2 60934823 60941907 Tpr2g5409 2 60934823 60941907 ECH