Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5389 ATGGAGACTAAGATTAGTACTTCAGAATTGGTTCCATTTATAATTATGGTGATTATGGAAGGGTGCACAATAGCACTAACTATATTTGCAAAAACTTCAATAACCAATGGAATGAGTCCATTTGTGTTCATTGTTTATACTAATGCTTTGGCTACTATAATTTTGTTTCCTTCTTCCTTTTTATTAAACCACCAAAACCTAAACAGAAAGGAGAAGCCACTTTTTACTTTCTCTTTGTTTATGAGATTCTTGCTACTTGGTTTTACTGGAATAACAATGACTCAAACACTTTTATTTTTGGGTCTAAGTTATAGTTCTCCAATACTTGTATGTGCCATGAGCCACTTGATCCCAACTTTTAATTTTCTCCTTAACATCATTCACAGGAAAGTAGAGTTGAATTTGAAAAACTCTAGTATCCAAGTACAAATGATTGGTATAATGGTATCAATATTTGGAGCAATAATAGCTGAATTTTTCAAAGGACCACTTATAAGACCTTCTTCTCATCACCTTAAACACACTAAGCAACTTTTTATCTTTTCCTCAACACCTGAATTTTGGGTTTTTGGTGGCATTTTACTTGCTGCTGCTTCTTTTTCAGTTTCAATTGCCAACTTTATTCAGAAAGAAACTGTTAAGCAATATCCAGAACCAATGAAGATGGTTTCTTATTACACCTTGCTTGGTATGATACTTAGTGCAATAGTCTCATGCATATTTGAGAGTGATGTAAATGCTTGGAAGCTAAAGCATAACATGGAGCTCATTCTCATTGTTTTAACGGCGATATTTGGGGGTGTGATTCGTCCGAATGTTCAAGTTTGGTTGAGTAGAATGAAGGGTCCACTTTATGTGCCACAGTTCAAGCCCTTTGGTATTGCTTTTGCCACCACTTTTGGAGTTTGCTTTTTTCCTAACAGCCTTCATTATGGAAGTGTGATAGGAGCAAGTGTAATTGGAATGGGTTATTATACAATATTGTATGGAGAATTCAAAGGAGATGAAGATGAGAAAAACTATGATGAAAGCTCAGATTCTTTGGACAAGAAGATTCCTCTTTTGCAAGAAAAGATGGAAGAGGTGTAA 1089 0.3489 METKISTSELVPFIIMVIMEGCTIALTIFAKTSITNGMSPFVFIVYTNALATIILFPSSFLLNHQNLNRKEKPLFTFSLFMRFLLLGFTGITMTQTLLFLGLSYSSPILVCAMSHLIPTFNFLLNIIHRKVELNLKNSSIQVQMIGIMVSIFGAIIAEFFKGPLIRPSSHHLKHTKQLFIFSSTPEFWVFGGILLAAASFSVSIANFIQKETVKQYPEPMKMVSYYTLLGMILSAIVSCIFESDVNAWKLKHNMELILIVLTAIFGGVIRPNVQVWLSRMKGPLYVPQFKPFGIAFATTFGVCFFPNSLHYGSVIGASVIGMGYYTILYGEFKGDEDEKNYDESSDSLDKKIPLLQEKMEEV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5389 362 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020|GO:0016021
Tpr2g5389 362 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020|GO:0016021
Tpr2g5389 362 PANTHER WAT1-RELATED PROTEIN 8 358 IPR030184 GO:0016021|GO:0022857
Tpr2g5389 362 PANTHER WAT1-RELATED PROTEIN 8 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5389 Tpr-Chr2 60732853 60735240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5389 1 360 Nodulin-like Gene Family AT1G70260 48.128 1.07e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5389 - - var:108330423 555.058