Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5388 ATGGGGAAAGTAACCGTTCCATTTATAGGGATGATAATTGCAGAGATTGTTCAAGTTGCTTTAATCATATTAAGCAAACAAGTTATGTCACAAGGAATGACAAGTTTCATATTCATTTTCTATTCAAATTCAATCGCTGCTCTTGTTCTTCTTCCTTCTTCATTCTTCATCCATAGATTTCAACGTCCTCCACTCACTTTTTCAAATCTTTCTGGTTTCTTCATACTTGGATTACTCGGTTATTTGGCGCAGGTTTTTGGATATGCTGGGATTAATTACAGCTCATCAACACTTGCTACAGCTATGCTTAATCTTATTCCTGGTTTTACCTTCATCCTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAAAAGCTCTAGCAGCTTAGCTAAATCATTGGGAACAATAGTATCTATTGCTGGTGCTTTTATTGCAACTTTATACAAGGGTGCTGCAATTCTGAAGGGACCGTCACCTACAAACTCATCTCAGCAACCACTTTTCTCACAAGATTTTAGTTGGATACTCGGAGGATTATTTCTTTCAGCTGATTGTGTGGTTGCTGCAGCATTTCTTATAGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGGGTTGATTGTTGTATTCTTTTACTGTTTTTTTGTGGCCATTCTATCTGCTGTGACCTGTTTGGCTGTGGAAAGAGATATCAGTGCTTGGAGCTTGGAACCCAAGCTAAGGTTGCTGTCAGTTTTATACTCGGGAATCTTTGGTTCAGCAGTTCAAGTTGGTATTACTACTTGGTGTTTGCACCAGACCGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATTGTCATATCGGTGGTTATAGGCGTTGTCTTCCTTGGCGATGCATTCTATCTTGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGATTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGCCAGAAACTTGGAATCAAGCGGCAACCAGACCCCCCTTTTGAAGGAAAACATCAGTGAAGAGATATGA 1038 0.3902 MGKVTVPFIGMIIAEIVQVALIILSKQVMSQGMTSFIFIFYSNSIAALVLLPSSFFIHRFQRPPLTFSNLSGFFILGLLGYLAQVFGYAGINYSSSTLATAMLNLIPGFTFILAVLFRMEQLDWKSSSSLAKSLGTIVSIAGAFIATLYKGAAILKGPSPTNSSQQPLFSQDFSWILGGLFLSADCVVAAAFLIVQASILKKYPAGLIVVFFYCFFVAILSAVTCLAVERDISAWSLEPKLRLLSVLYSGIFGSAVQVGITTWCLHQTGPVFVSMFKPIGIVISVVIGVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEARNLESSGNQTPLLKENISEEI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5388 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 319 - -
Tpr2g5388 345 PANTHER WAT1-RELATED PROTEIN 8 326 - -
Tpr2g5388 345 PANTHER WAT1-RELATED PROTEIN 8 326 IPR030184 GO:0016021|GO:0022857
Tpr2g5388 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 149 - -
Tpr2g5388 345 Pfam EamA-like transporter family 9 145 IPR000620 GO:0016020|GO:0016021
Tpr2g5388 345 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5388 Tpr-Chr2 60725898 60729403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5388 6 344 Nodulin-like Gene Family AT5G40230 43.391 1.72e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5388 - - gmx:100804932 534.258