Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5387 ATGTTTATTTTCAGTTATTTGGCTCAGGTTTGTGGATATGTTGGGATTTATTATAGCTCATCAACACTTGCTACAGCTATGCGTAATCTTGTTCCTGGTTTTACCTTCATTCTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAGCTCTAGCAGCTTAGCTAAATCATTGGGAACAATAGTATCAATTGCTGGTGCTTTAATTGCAATTTTATACAAGGGTGCTGCAATTCTGAAGGTACTGTCGCCTGCAAACTTATCTCAGCAGCCACTTTCCTCACAAGATTTTAATTGGATACTCGGAGGATTATTTCTTGCCGCTGATTGTGTGATGGCTTCACCATTTACTATAATACAGGCTACTGTTCTTAAGAAATATCCAGCAGAGTTGATTTTTGTATTCTTTTATTGTTTCTTTGTTGCCATTCTCTCTGGTGTCACCTGTTTGATTATGGAAAGAGACATCGGTGCTTGGAGCTTGGAACCCAAGCTAAGGTTGCTATCAGTTTTATACTCGGGAATCTTTGGTTCTGTAGTTCACGTTGGTGTTACTGCTTGGTGTTTGCGCCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATTGTCATATCGGTGGTTATAGGCGTTGTCTTCCTCAGTGATGCATTCTATCTTGGAAGTTTGATTGGTGCTACTGCTATTGTTATTGGGTTTTATTCTGTATTGTGGGGTAAATCCAAAGATATTGAAGCCACAAGCTTGGAATCAAGCGGCAACCAGACCCCCCTTTTGAAGGAAAACATCACTCAAGACATATAG 813 0.3973 MFIFSYLAQVCGYVGIYYSSSTLATAMRNLVPGFTFILAVLFRMEQLDWRSSSSLAKSLGTIVSIAGALIAILYKGAAILKVLSPANLSQQPLSSQDFNWILGGLFLAADCVMASPFTIIQATVLKKYPAELIFVFFYCFFVAILSGVTCLIMERDIGAWSLEPKLRLLSVLYSGIFGSVVHVGVTAWCLRQTGPVFVSMFKPIGIVISVVIGVVFLSDAFYLGSLIGATAIVIGFYSVLWGKSKDIEATSLESSGNQTPLLKENITQDI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5387 270 Pfam EamA-like transporter family 106 240 IPR000620 GO:0016020|GO:0016021
Tpr2g5387 270 PANTHER WAT1-RELATED PROTEIN 3 251 - -
Tpr2g5387 270 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 244 - -
Tpr2g5387 270 PANTHER WAT1-RELATED PROTEIN 3 251 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5387 Tpr-Chr2 60722854 60724828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5387 8 258 Nodulin-like Gene Family AT3G28050 45.238 1.68e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5387 - - gmx:100804932 394.815